Protein

View in Explore
Genbank accession
QDH50629.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIGNPISSQNNYRVLRFSATAGQTLFTVTDGYTLGKLSLFRNGVRLTNSTDYTAADGSTVTLNDACQAGDEISIEVLDTFAVPDAIVGSASSQTISGDLVVTGTLYASVDGIGEVGIQSGGTTIGITSTLNFTGAGNTVTLKGDGSIDIAISGGARGGGPDKVFQENQRVVTTNYQLTSGYSAVSVGPVSVSAGVTVTIPGSERWVIL
Physico‐chemical
properties
protein length:209 AA
molecular weight: 21255,30580 Da
isoelectric point:4,34218
aromaticity:0,06220
hydropathy:0,15933

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B43
[NCBI] 		2484638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH50629.1 [NCBI]
Genbank nucleotide accession
MN018232.1 [NCBI]
CDS location
range 154994 -> 155623
strand -
CDS
ATGGCCATTGGAAATCCTATATCCAGTCAAAATAATTATAGAGTATTAAGGTTTTCCGCAACTGCAGGACAGACTTTATTTACAGTCACTGATGGTTATACCCTCGGCAAACTGTCTCTGTTTAGAAATGGTGTTCGTCTGACGAATTCCACTGACTACACAGCAGCTGATGGTTCTACTGTCACACTGAATGATGCTTGTCAAGCAGGTGATGAAATCTCGATTGAGGTTCTTGATACCTTTGCTGTTCCTGATGCCATTGTAGGTTCAGCATCATCACAGACTATCAGTGGTGACCTGGTAGTCACTGGAACACTTTATGCAAGTGTTGATGGTATTGGTGAAGTTGGTATTCAATCAGGTGGTACAACCATTGGTATTACATCCACACTGAACTTCACTGGTGCTGGTAATACAGTCACATTGAAGGGTGATGGTTCTATTGATATTGCAATCTCTGGTGGTGCAAGAGGTGGTGGACCTGATAAAGTCTTCCAAGAGAACCAGAGAGTTGTGACAACCAATTATCAATTAACATCAGGATACAGTGCGGTCAGTGTTGGTCCTGTTTCAGTATCAGCTGGGGTTACAGTGACTATCCCTGGTTCTGAAAGATGGGTCATTCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65a9adab9f28c5f2f57e1e6e73218a51c95f783ea81e72303c64a9792ce06dd2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7282
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome sequencing of the novel cyanophage S-B43 from the Bohai Sea, China Wang,M. 2020-10 — GenBank