Protein

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Genbank accession
QEP29448.1 [GenBank]
Protein name
minor structural protein 2
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDSYGALYAPAVGQAQVTANGVKQTENATSQLNAYQKKLLLAKVWRVNHNADGSKSFSISASYFVNVTYSGVYYGTISIPSFSVSLNKIPRKSSLNPVPDLNIPNKLGVSITRQSSSFTHNLTVWVANRTNPTLDNDSHWVYLNSIENVGTSGTFTFSVANFTEMFKRMGTSTEWVGKVKLWTNGLSESVPSQQRTFRIKPPMNAQASGGKLKVKAGEKITVSLSNFQSDGNFKYTGVFDYRGVSIPVATNVHANSMTLTLTQANVDSILKESPDDAGTWGQVRVTSYYNGVQYRTPWTGQHIDCTIPKEDYLPVINGTPTYTDLSAEATNVTGSNQVALQSKSNIRVTIPANFATGQGFSTIKTVQASLGGATKTANYNASGFNIDIGAPNEGTASSLVVTVLDGRGFSTSWTKTVQVYPYSNPDVNYTIARRNNFEVDTELAVSSSWAPVTIGGVNKNAITSVTYATKRSGTSTWGEETPVTFSTDGAKVIVPTTVVQLPNEYSWNFRLTIKDKFGSFSKEANISAGKPIMFIDAVRESVGFGNLTGTGENRNLNGVIEIEAERYHTTGKTGIQMNNSDISGLNGIYFSNDVMDNDGEGLHFIKSGKDVNSSNKKDYDYMYMRDGGFYVNHDGTPIFKVTDNGRMYYPASHLWSGGWYMSGTQNITPSKPMSECRNGWVLMWAKYQNSTQTWNDVVQVYLGKDLVTTHSGLGVRLLFGGYGNVVIHKYLTITDTEVRGNASNTNASLNADRAILVRVHEW
Physico‐chemical
properties
protein length:762 AA
molecular weight: 83318,97490 Da
isoelectric point:8,87428
aromaticity:0,10367
hydropathy:-0,35302

Domains

Domains [InterPro]
DC_1676
ATT
1–81
DC_1676 DC_0631 IPR008577
IPR008577
STR
27–200
IPR008577 DC_1167
QEP29448.1
1 762
Architecture
ATT
STR
STR
ATT 1-81 | STR 82-212 | STR 215-762
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEP29448.1
1 762
Domain Start End Length (AA) Confidence
N-terminal 1 51 51 0,1234
Central domain 52 347 297 0,8299
C-terminal 348 762 414 0,5106
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-51
Central
52-347
C-terminal
348-762

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage PEf771
[NCBI] 		2601638 Uroviricota > Caudoviricetes > Herelleviridae > Schiekvirus > Schiekvirus Pef771
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEP29448.1 [NCBI]
Genbank nucleotide accession
MN241318 [NCBI]
CDS location
range 28298 -> 30586
strand -
CDS
ATGGATTCCTATGGTGCTTTATATGCTCCTGCTGTTGGACAAGCACAGGTAACAGCTAATGGAGTTAAGCAAACCGAAAATGCAACATCACAATTGAATGCTTATCAGAAAAAACTATTGCTAGCCAAAGTTTGGCGTGTAAATCATAACGCAGATGGTAGCAAGTCTTTTTCTATATCTGCTAGTTACTTTGTAAACGTAACCTATTCAGGTGTTTACTACGGAACAATCTCGATACCGTCATTCTCGGTTTCATTAAATAAAATTCCACGTAAAAGTTCGTTAAACCCTGTGCCAGATTTAAATATTCCTAATAAACTAGGGGTAAGTATTACCCGACAAAGTTCTAGTTTTACACATAATTTAACTGTTTGGGTAGCCAATAGAACAAACCCTACATTAGATAATGACTCCCATTGGGTGTATTTAAACAGTATTGAGAACGTAGGTACAAGTGGTACATTCACATTTAGTGTAGCAAACTTCACAGAAATGTTCAAGAGGATGGGTACAAGTACCGAATGGGTAGGCAAGGTGAAGCTCTGGACGAATGGTTTAAGCGAGTCAGTGCCGAGCCAACAACGAACCTTCCGAATAAAACCTCCAATGAACGCACAGGCTTCTGGGGGTAAGTTAAAAGTAAAAGCAGGAGAAAAGATTACTGTTAGTCTAAGTAACTTCCAATCTGACGGTAACTTTAAATATACAGGTGTTTTTGATTATCGAGGGGTATCCATACCAGTAGCAACAAATGTACATGCAAACTCTATGACTCTTACATTAACCCAAGCAAACGTGGATTCTATCTTGAAAGAATCTCCGGATGATGCAGGAACATGGGGGCAAGTACGAGTAACAAGTTACTACAATGGTGTACAATATCGAACTCCTTGGACTGGACAGCATATTGATTGTACCATTCCTAAAGAAGATTACTTACCTGTAATAAACGGAACACCGACTTATACTGACTTAAGTGCCGAAGCTACTAACGTTACCGGAAGTAACCAAGTAGCATTACAAAGTAAGTCTAATATCCGTGTGACTATTCCGGCTAACTTTGCCACAGGTCAAGGATTCTCAACAATTAAAACCGTGCAAGCTTCATTAGGTGGGGCTACAAAAACTGCTAACTATAATGCTTCTGGTTTTAACATTGATATTGGTGCTCCAAATGAAGGTACTGCTTCTTCATTAGTTGTTACTGTTCTAGACGGTCGAGGATTTAGTACATCTTGGACAAAAACAGTTCAAGTATATCCATATAGCAATCCAGATGTTAACTATACGATTGCCCGTAGAAACAACTTTGAAGTAGATACAGAATTAGCTGTTTCAAGTAGTTGGGCGCCTGTTACTATCGGTGGTGTAAACAAAAATGCAATTACGTCAGTAACCTACGCAACTAAACGTTCAGGTACAAGTACATGGGGAGAAGAAACACCAGTAACTTTCTCCACAGATGGGGCTAAAGTTATTGTCCCAACAACCGTTGTTCAGTTACCTAATGAGTACAGTTGGAATTTCAGACTAACTATCAAAGATAAGTTTGGTAGCTTCTCTAAAGAAGCAAATATTTCTGCCGGAAAACCTATTATGTTTATTGATGCTGTTCGTGAATCTGTAGGTTTTGGTAACCTGACAGGTACAGGAGAAAATAGAAACCTTAATGGTGTAATTGAAATTGAGGCGGAACGCTACCATACTACAGGTAAAACTGGTATCCAAATGAATAACAGTGATATTTCTGGTTTGAATGGAATATATTTCTCAAATGACGTAATGGATAACGATGGTGAAGGATTGCATTTTATCAAGTCAGGGAAAGACGTTAACTCTTCCAATAAAAAAGACTACGATTATATGTATATGAGAGACGGCGGATTCTATGTTAACCATGATGGTACTCCAATCTTTAAAGTTACTGATAACGGTCGTATGTATTATCCTGCCTCTCATTTGTGGTCTGGTGGTTGGTATATGTCTGGTACACAAAATATAACCCCATCGAAACCAATGTCAGAGTGTAGAAATGGATGGGTACTCATGTGGGCTAAGTATCAAAATAGCACACAGACATGGAATGATGTTGTACAGGTATATTTAGGTAAGGACTTAGTAACAACACATAGTGGACTAGGTGTAAGATTACTATTTGGTGGTTATGGTAACGTTGTTATCCATAAATATTTAACGATTACTGATACAGAGGTTAGAGGTAATGCTTCAAACACCAATGCTAGTTTAAACGCTGACAGAGCTATTTTAGTTCGTGTTCACGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de32fb5755ac4096ae347f11c68764048edbba1f1930e97a0d14e21aca048bf4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characteristics and whole genome analysis of the Enterococcus faecalis phage PEf771 Xiang,Y., Ji,X., Wei,Y., Song,F., Li,W. and Yang,X. 2020-09 — GenBank