Protein

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Genbank accession
UYE97189.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MPANFKKFDVKHGLSVNGLEFVDENRNVTLNNLTVQGTSTVVDTRTVTQTDPIIGLGVAGKTLSVSGITVAGPGRISVSGIVGDPDSTAADAFADIAVGDSFQYNSTGNDATPLVSGQVYYVVAKDTDVTSSTYRTFTFSSNQGGTASTVTSSGSGTQTIILNPLRDLGQDLGIEFNYVDSGAKKGFFGFDDSTGHFTFLKDTTYRGQSTQSDDGVPNLPDFIGTKSGAEFSYAKLEPTNSLTSNQSALDIDQTWNNAGATFKAIEIDVVDTNSAASSSLLDITSGGRQRLLLRKDGVLSLNTANQTGVLTLVQDANTQSSTLKLIDATGTWNDGTATFVGIDLNVTRTNSGVLSKLVNFHINSVSNYSLNRFALATHKVEFSGGGLQTAYLLNVTDSSSDANSLLLDLQVGGSSKFSVDKDGDVIAQGSLTTEGNFVANGSGNFENAIVIQSQTNGSGSYANTTEFQTQTSTIAAGSSTASTFSSFTAASFTTAKVLVQVKQGSSIHSTELLLIHDGTDVWLTEYGTICNSDILVTFDAVVTGGNVVIQATNTAASVTANALTTIKTTRTAITA
Physico‐chemical
properties
protein length:575 AA
molecular weight: 59979,15400 Da
isoelectric point:4,55141
aromaticity:0,07304
hydropathy:-0,07652

Domains

Domains [InterPro]
DC_1607
STR
150–391
DC_1607 IPR027412
DC_1556
RBD
336–575
DC_1556
UYE97189.1
1 575
Architecture
STR
RBD
STR 150-391 | RBD 392-575
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97189.1 [NCBI]
Genbank nucleotide accession
OP053362.1 [NCBI]
CDS location
range 14159 -> 15886
strand -
CDS
ATGCCAGCTAACTTTAAAAAGTTCGACGTAAAACATGGCCTGTCGGTAAACGGGCTGGAGTTTGTCGACGAGAATCGTAACGTTACCCTAAATAATCTCACAGTACAGGGTACATCAACTGTTGTTGATACAAGAACAGTTACTCAAACAGATCCAATCATCGGCCTGGGTGTTGCCGGAAAAACATTATCGGTTTCTGGGATTACCGTAGCGGGTCCAGGAAGAATCAGTGTCAGTGGTATAGTCGGAGATCCTGATAGTACTGCAGCTGATGCGTTTGCAGATATCGCTGTTGGAGACTCTTTTCAGTACAACTCAACAGGAAACGATGCGACTCCTTTAGTATCTGGGCAAGTTTACTACGTAGTTGCAAAAGACACTGATGTAACAAGCTCTACATATAGAACATTTACATTTAGTTCTAATCAGGGTGGAACCGCATCTACAGTAACAAGCAGTGGCTCTGGAACTCAGACTATCATCCTCAACCCTTTGAGAGATCTAGGACAGGATCTTGGTATCGAGTTTAACTATGTAGATTCTGGCGCTAAGAAGGGTTTCTTTGGTTTTGATGATAGCACTGGCCACTTTACATTTTTAAAGGATACAACCTATAGAGGCCAATCTACACAATCAGATGACGGAGTTCCTAACCTTCCTGATTTCATAGGAACTAAATCTGGAGCTGAATTTAGCTACGCTAAGCTAGAACCAACAAACTCTCTTACGAGTAATCAATCTGCACTAGATATTGATCAAACTTGGAATAACGCCGGGGCTACGTTTAAAGCCATCGAGATTGATGTTGTTGATACTAATTCGGCTGCTAGCTCGAGTCTTTTAGATATTACATCTGGTGGTAGACAGAGATTACTACTTCGTAAAGACGGTGTCTTATCTCTAAATACTGCTAACCAAACAGGCGTATTAACTCTAGTACAAGATGCTAATACCCAGTCAAGTACTTTAAAATTAATTGATGCCACCGGTACTTGGAACGATGGGACCGCGACTTTTGTAGGCATTGATCTTAACGTTACAAGGACTAATTCTGGCGTTCTTTCAAAGCTTGTTAATTTCCATATTAATAGCGTCAGCAATTATTCTTTAAATAGATTTGCTTTAGCTACTCATAAAGTAGAGTTCTCAGGTGGTGGTCTACAAACTGCGTATTTACTTAATGTTACAGATTCTTCTTCTGACGCTAATTCCCTTCTCTTAGATCTCCAAGTTGGCGGTTCTTCCAAGTTTAGCGTAGATAAAGATGGTGACGTAATTGCTCAGGGTAGCCTAACAACAGAAGGAAATTTTGTTGCCAATGGCTCTGGTAACTTTGAAAATGCTATTGTCATTCAGTCTCAGACAAACGGTTCTGGTAGTTACGCTAATACTACAGAGTTTCAGACCCAGACTTCTACTATTGCTGCCGGATCTTCCACAGCTTCTACTTTTAGTTCCTTCACTGCTGCATCATTTACAACTGCTAAGGTTCTCGTGCAAGTTAAGCAAGGATCTAGCATCCATTCTACAGAGCTCTTACTTATTCATGATGGCACCGACGTATGGCTAACAGAATACGGAACAATTTGCAACTCTGACATCCTTGTTACTTTTGATGCTGTTGTTACTGGAGGTAACGTTGTAATTCAAGCTACTAATACAGCTGCTTCGGTTACTGCAAATGCTCTTACAACAATTAAGACCACAAGAACTGCAATTACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf0dee2a4542a26d9313e8814cc111203443ea06dad1ffae69649c37d317f6c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank