Protein

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Genbank accession
AUR98433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
ATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPINTSTNRTGGVNKTLDALEAEYLEAIQGAGGESIGTWAAGVTTFTKYNEYAVYNGIPYKPRTSATLPYVAQGSDPTVAPDDANVQPYQEITEAQVPGAISKYTAYLADSVSSVFTGTTGGGPVSLETGQSWIVSDYIGGPTPNGSGNLFFKVVPAGTGVADGGRRIDVPGGVYQLEQIMKIKVDVKDYGAIAGTDQTALIQTVSDNNDYTQISSDYLIEAIPGIRPKTGKTIEFLGGAKLSVITQNFGAYQALMVLDADSVDIINPRVTGDRVSNASLTGEWGHCIAVIGSSNVNIYSAYTQDGFGDGIYIGKNYSDDGSTFITSPNENVNVNFHGKTVCHNNRRDNISVITGDVTFGELTLTKDITGIAPDAGFNIEPNTANEPLNVTTGKITTSGHQGSGVTIGLRNFNELTPFFNIDMAEISSSNDRDFNLSTPGEAHGSIVIGNAVISKAKKNGFKGEKLDNAGGMSILINSLKLINCNTSGDASTRDGSAVSIWRNTSLTTYPLGGVNVNHLYIDSPDSTSGVYFNDESATAIAEAPLVIGNLEKINTQGVAIISSSAVVVNDPNEILTKNLEPAESATYSYSTSDYKRLIRTHSTKGTIIVLPQINPGEYKGLQLRVIFRAQGFTQRVKPSGTNRIAFDGQIAGKGLDVAMEGATLDLRWNGSSEWEVLNLNGDFTKEV
Physico‐chemical
properties
protein length:720 AA
molecular weight: 76175,63250 Da
isoelectric point:4,77484
aromaticity:0,07361
hydropathy:-0,21944

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98433.1
1 720
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9957
Central domain 234 604 372 0,9823
C-terminal 605 720 115 0,9736
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-604
C-terminal
605-720

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.251.O._10N.261.55.E5
[NCBI] 		1881355 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98433.1 [NCBI]
Genbank nucleotide accession
MG592618.1 [NCBI]
CDS location
range 1 -> 2165
strand +
CDS
TGGCAACTCCCGGAGGCTTGGTCGACAAGCAAGAATTAATCGACGCACAACTCGACACGGCGCACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCGGGCGCTCCTATCAACACGTCTACAAACCGTACAGGCGGAGTGAATAAAACACTCGACGCGCTTGAGGCGGAGTACCTTGAAGCGATTCAGGGTGCGGGGGGCGAATCAATCGGTACGTGGGCTGCGGGCGTTACGACCTTCACCAAGTACAACGAATACGCTGTGTATAACGGTATCCCGTACAAACCGCGAACCTCCGCGACCCTGCCGTACGTGGCGCAAGGGTCCGACCCTACAGTCGCACCAGACGACGCGAACGTTCAGCCGTACCAAGAGATCACCGAAGCACAGGTGCCGGGTGCCATTAGCAAATACACCGCATATCTTGCGGACTCGGTGTCATCTGTCTTCACAGGTACTACGGGGGGAGGACCGGTGTCTCTAGAGACAGGCCAATCGTGGATTGTTTCGGATTATATAGGAGGACCTACACCTAACGGGTCAGGTAATCTATTTTTCAAGGTTGTGCCAGCCGGAACCGGTGTAGCTGACGGTGGTCGACGCATTGACGTACCTGGCGGCGTCTATCAACTAGAACAAATCATGAAAATAAAGGTGGACGTGAAGGATTACGGCGCTATCGCCGGGACTGACCAAACAGCCTTAATACAGACGGTGTCGGATAACAACGATTACACTCAAATAAGCTCAGATTATCTAATTGAAGCAATCCCGGGAATTAGGCCAAAAACCGGTAAAACAATTGAGTTCTTAGGTGGCGCTAAGTTATCCGTCATTACGCAAAACTTCGGAGCTTACCAAGCGCTAATGGTTTTAGACGCAGACTCCGTAGATATTATAAACCCTAGGGTTACTGGTGACAGGGTAAGCAATGCTTCATTGACTGGAGAGTGGGGTCACTGCATCGCTGTGATTGGTTCGTCAAATGTAAACATTTACAGCGCTTACACTCAAGACGGTTTTGGGGACGGGATTTACATTGGTAAGAATTACTCAGACGATGGAAGTACGTTTATCACTAGCCCTAACGAAAACGTAAACGTAAACTTTCACGGAAAGACCGTTTGCCATAACAATCGAAGAGATAACATTTCGGTAATAACTGGTGATGTTACATTCGGAGAGTTAACTCTAACAAAGGATATTACGGGGATAGCGCCGGATGCGGGATTCAACATTGAACCAAACACCGCCAACGAACCGTTAAATGTAACAACTGGGAAAATAACTACGTCAGGACATCAAGGCTCTGGGGTTACAATAGGTCTGAGGAACTTCAATGAATTAACTCCGTTTTTCAATATAGACATGGCTGAAATTTCAAGTTCGAACGATAGGGATTTTAACCTATCAACACCCGGTGAGGCTCACGGTTCTATTGTGATCGGTAATGCAGTTATTTCCAAAGCAAAGAAAAACGGATTCAAGGGCGAGAAGTTAGATAACGCAGGTGGTATGTCTATTCTAATAAACTCGTTGAAATTGATAAACTGCAATACCAGCGGGGATGCTTCAACCCGCGACGGGTCCGCAGTGTCAATATGGAGAAACACAAGCCTGACAACGTACCCGCTAGGGGGGGTTAACGTCAACCACCTGTACATAGACTCTCCAGATTCAACAAGCGGTGTGTATTTTAACGATGAGTCGGCTACAGCGATCGCAGAAGCTCCTTTAGTTATAGGTAACTTAGAGAAAATTAACACACAAGGTGTTGCTATAATCTCGTCGTCTGCGGTTGTCGTCAATGACCCTAATGAAATACTAACTAAAAACCTAGAACCTGCGGAATCAGCGACCTATAGTTATTCAACTAGTGACTACAAGAGACTTATAAGAACCCATTCCACAAAAGGAACTATAATAGTATTACCTCAAATAAACCCCGGTGAGTATAAAGGACTTCAGTTGAGGGTGATATTTAGAGCGCAAGGGTTCACACAAAGAGTTAAACCTTCCGGCACTAACAGAATCGCATTTGATGGGCAGATTGCAGGTAAGGGGTTAGACGTCGCAATGGAGGGTGCAACTCTTGACTTAAGATGGAATGGATCCTCCGAATGGGAGGTTTTAAACCTAAATGGAGACTTTACGAAAGAGGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d9cda6deb9ac3001054818ef4ea7d0c8117210dc86418884ba92c688a98a01e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank