Protein

Genbank accession
CAB4159467.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MSTPEDKPISGLPEVFSANSGDIIPIVAGGTTSFIQYSNLMSSSSGISGSNGTSGSSGTSGSSGTSGTSGTSGLSGTSGSSGSSGLVAYTLPNTPTPGSTWILLGTWSTAQTGHTLRMNLSAHAGYNAGFEQNQTTDLFFATSNGISTNPSAIGGAYYANGSAVRTESLGTANTAPSLFRIVQSNTSTYLIYGRFDQWAGNSHYTISVSGATTWTHDGGLIGTTPSGTYLDITPASGGSSSSGSSGTSGVSSTLDQNYVQVLGTQVSNVTTLGSVLVSGSITTNGGPVSVMVTGDANPVGGTSFARLQIHRNGVAVGNIVQAENGSNLNVPYCVTFIDDQPAGTYTYSLRTVGAIGGTLNFGEATGPTLTMIELIGSGSSGTSGISGTSGTSGLSGTSGTSGIDGSSGLSGTSGTSGIDGSSGTSGIDGSSGTSGIDGTSGTSGIDGTSGTSGIDGSSGTSGIDGSSGTSGIDGTSGTSGSSGASSFYSVTEVTTASYSATLNDSPTQYFGISHPSASATITMPDYTSDGKVIIVKDESGNASIFPITVNASKIDQSNQAILALDNGSITMVWRGDTWWII
Physico‐chemical
properties
protein length:581 AA
molecular weight: 57181,88880 Da
isoelectric point:4,21071
aromaticity:0,06368
hydropathy:-0,08898

Domains

Domains [InterPro]
PTHR24637
48–484
PTHR24637
IPR008160
378–435
IPR008160
CAB4159467.1
1 581
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4159467.1 [NCBI]
Genbank nucleotide accession
LR796670 [NCBI]
CDS location
range 173275 -> 175020
strand +
CDS
ATGTCAACACCAGAAGATAAGCCGATATCGGGGCTACCTGAAGTATTTAGTGCAAATAGTGGCGATATAATACCTATAGTTGCCGGCGGAACCACGAGTTTTATACAGTATTCTAATCTCATGTCCAGTTCCTCAGGTATAAGCGGTTCTAATGGAACTTCTGGTTCATCTGGGACTTCAGGCTCTAGTGGAACATCAGGAACTAGCGGAACTTCTGGATTATCTGGCACCAGTGGTTCTAGTGGAAGCTCTGGATTAGTTGCCTATACTCTTCCTAATACACCAACACCTGGTTCAACTTGGATATTATTAGGTACCTGGAGTACCGCACAGACAGGGCACACATTAAGAATGAATCTATCAGCACATGCTGGTTACAATGCTGGATTTGAACAAAATCAAACTACTGATTTGTTTTTTGCTACATCAAATGGAATTTCAACAAATCCTTCAGCGATTGGTGGAGCTTATTATGCTAATGGATCTGCAGTTAGGACTGAATCTCTTGGAACAGCAAATACTGCTCCAAGTCTATTTAGAATTGTTCAATCTAATACAAGTACTTATTTAATCTATGGTAGATTTGATCAATGGGCTGGAAATTCACACTATACTATATCAGTAAGTGGTGCTACGACTTGGACACATGATGGTGGACTTATAGGCACAACTCCTTCTGGTACTTATTTAGATATAACACCAGCTAGTGGTGGTTCTAGTAGTAGTGGTTCTTCAGGAACATCTGGAGTTTCTTCAACACTTGATCAGAATTATGTACAAGTTTTAGGAACACAAGTTTCTAATGTTACTACTTTAGGATCAGTACTAGTATCCGGTTCTATTACAACTAATGGTGGTCCTGTAAGTGTAATGGTGACTGGTGATGCAAATCCTGTTGGTGGAACTTCTTTTGCAAGACTTCAGATTCATAGAAATGGCGTTGCGGTTGGTAATATAGTACAGGCTGAGAATGGTAGTAATCTAAATGTACCATATTGTGTAACTTTTATAGATGACCAACCAGCTGGTACATACACATATTCACTAAGGACTGTTGGTGCTATTGGTGGTACATTAAATTTTGGCGAAGCAACTGGGCCAACTCTTACTATGATCGAACTAATTGGATCTGGATCAAGTGGTACCAGCGGCATTAGCGGTACTTCAGGGACAAGCGGTTTATCAGGTACTAGTGGAACTAGCGGTATTGATGGATCAAGCGGTTTATCAGGTACAAGTGGTACTAGCGGTATTGATGGATCAAGTGGTACTAGCGGTATTGATGGATCAAGTGGTACTAGCGGCATTGACGGTACTAGTGGAACATCAGGCATTGACGGTACTAGTGGTACTAGCGGTATTGATGGATCAAGTGGTACTAGCGGTATTGATGGATCAAGTGGTACTAGCGGCATTGACGGTACTAGTGGAACTTCAGGATCTAGCGGGGCTTCTAGTTTTTATTCGGTGACCGAAGTAACTACTGCTTCTTACAGTGCAACATTAAATGATAGCCCAACTCAATATTTTGGAATTTCACACCCTTCAGCATCAGCCACTATAACTATGCCTGATTACACGTCCGACGGAAAGGTTATAATTGTTAAAGATGAGTCAGGAAATGCTTCAATTTTTCCAATAACAGTAAATGCATCAAAGATTGATCAATCAAATCAAGCTATACTTGCTTTAGATAATGGTTCAATTACTATGGTGTGGAGAGGTGATACTTGGTGGATAATATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1165371e4429f95ff3f70d43bdba1fad59be6f484d677527685e0160715c5e64
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6381
Evidence 0,6381
Download PDB

Literature

No literature entries available.