Protein

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Genbank accession
CAC17009.1 [GenBank]
Protein name
EPS-depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPETKIKPWNTEIWTDSIATLRTMDPVVSGHTVEVAGYYKGSLKGGGKFAYDPNDTTTADDGGFTIVTATGKRFKRADPIDTLDITHFGAYCNGIADDMFAVVRMRAWAATINATFNPGVRIPSGITTLSAYDFGSSELPSFKIRGPEVAYGRIPAAQIQPFDLSYTGYLIKVKARRMEVSNLMLSGVGSQCGFLENTVTRGDYCRIHGIQARNLTGRAFHVYDTIDTAVTQCYSTSGKASFFRTDWSNENPGAWDHPTAIYIADCNFETHTGEYAVSCIRAGQSVMRNCWFDRNERGFDISQGGWLLENITQENSVYPSATQYAKIVQIRNRFTQGKGMDDTVSGYDPSQDPSGQPPSWVNSGYENGTAEFALLGFINSGSMSYGYESSQFKVSNMTANQVWIDVGSFTLAGATGEGINLEFVGAGHFDAATSNPRPNGTNYGGGKTTIMMQQKDSDAKARASWFSHGASPIVAVRVAMNRNRPHVYIQLAPYTGPIAMTVHTSSKSNFEGGIHYYQNIVMTEVTADVAAAAAPLIPATWNVSNGNYGLGMQLDTGKLAVDGPALAGSNASSHFPIQYNGKDVLLAVQPSPLSTRIQRCTIATLPKATENPYGVVLVSDAVSGKGVTTWRMAFCDGSAWFTVDGGTNLGTGTVSNT
Physico‐chemical
properties
protein length:657 AA
molecular weight: 70873,40710 Da
isoelectric point:6,08054
aromaticity:0,10350
hydropathy:-0,25251

Domains

Domains [InterPro]
DC_0717
ATT
9–105
DC_0717 DC_0716
IPR011050
STR
79–325
IPR011050
CAC17009.1
1 657
Architecture
ATT
STR
ATT 9-105 | STR 106-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAC17009.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9840
Central domain 99 376 279 0,9722
C-terminal 377 657 280 0,9789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-376
C-terminal
377-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phi-Ea1h
[NCBI] 		130675 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAC17009.1 [NCBI]
Genbank nucleotide accession
AJ278614 [NCBI]
CDS location
range 1322 -> 3295
strand +
CDS
ATGCCGGAAACTAAGATTAAGCCGTGGAACACAGAGATTTGGACTGATTCCATCGCTACATTACGTACTATGGACCCGGTAGTCTCTGGACATACCGTGGAAGTGGCAGGTTACTACAAGGGTTCTTTGAAGGGTGGCGGCAAGTTCGCTTATGACCCTAATGACACAACCACCGCTGATGATGGCGGGTTTACCATTGTCACTGCTACTGGCAAGAGATTTAAGCGTGCAGACCCCATCGACACCCTGGATATTACTCACTTCGGTGCGTACTGCAATGGGATTGCTGATGATATGTTTGCAGTAGTTCGTATGCGTGCATGGGCAGCTACCATTAATGCAACGTTTAACCCAGGTGTGCGTATTCCATCTGGTATTACTACGCTGAGCGCTTATGACTTTGGTAGCAGTGAGCTTCCATCGTTTAAGATTCGTGGGCCTGAAGTTGCCTATGGACGCATCCCCGCTGCACAGATTCAACCGTTCGACCTGTCTTACACTGGGTATCTTATCAAGGTGAAGGCACGCCGTATGGAAGTATCTAACCTGATGCTGAGTGGTGTTGGTAGTCAGTGTGGGTTCTTGGAGAACACTGTGACCCGTGGTGACTATTGCCGCATTCATGGTATACAGGCACGTAACCTGACTGGTCGTGCATTCCATGTGTACGATACCATCGATACCGCTGTGACCCAGTGTTACTCAACCAGTGGCAAGGCTTCGTTCTTCCGTACTGATTGGTCGAATGAAAACCCAGGTGCATGGGATCACCCAACGGCTATCTACATCGCAGACTGTAACTTTGAAACTCACACAGGTGAGTACGCAGTGTCGTGTATTCGTGCAGGTCAGTCTGTCATGCGCAACTGCTGGTTTGACCGTAACGAGCGTGGCTTCGATATCTCACAAGGCGGCTGGTTGCTGGAGAACATCACACAGGAAAACAGTGTGTACCCATCTGCAACTCAGTATGCGAAGATCGTTCAGATTCGTAACCGCTTTACTCAGGGTAAGGGTATGGATGATACCGTGTCTGGCTACGACCCATCGCAAGACCCGTCAGGCCAGCCACCATCCTGGGTAAACTCAGGTTATGAGAACGGCACTGCTGAATTCGCGCTGCTGGGCTTCATCAACTCCGGCTCAATGTCTTACGGTTATGAATCATCTCAGTTCAAAGTCAGCAACATGACTGCGAATCAGGTGTGGATTGACGTAGGCTCGTTCACGTTGGCTGGGGCTACTGGTGAAGGTATTAACCTTGAGTTCGTTGGTGCAGGTCACTTTGATGCTGCTACTTCCAACCCACGTCCAAATGGAACCAACTACGGTGGTGGTAAGACGACCATCATGATGCAGCAGAAGGACTCTGATGCGAAGGCCCGTGCAAGCTGGTTCTCACATGGTGCATCGCCTATCGTGGCTGTGCGCGTAGCCATGAACCGGAACCGCCCACACGTCTACATCCAGCTGGCTCCGTACACTGGCCCAATTGCGATGACCGTGCATACCAGCTCGAAGTCTAACTTTGAGGGTGGTATTCACTACTACCAGAACATCGTGATGACCGAGGTTACAGCTGACGTAGCCGCAGCCGCTGCTCCACTGATTCCCGCAACATGGAACGTGTCGAACGGTAACTACGGTTTGGGTATGCAGCTGGACACTGGTAAGCTGGCCGTGGACGGTCCGGCGCTGGCGGGCAGCAATGCGAGTTCTCACTTCCCTATCCAGTACAACGGCAAAGATGTGCTGCTGGCGGTACAGCCTAGCCCATTGTCTACCAGGATTCAGCGCTGCACCATCGCCACATTGCCTAAAGCTACAGAGAACCCCTATGGGGTAGTCCTTGTATCTGATGCGGTGTCTGGTAAGGGTGTAACCACCTGGCGCATGGCATTCTGTGATGGCTCTGCATGGTTCACTGTAGATGGTGGAACTAACCTGGGTACTGGTACAGTATCTAACACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8a7927873db2e73dca01031a09ac03a3e269a5d35b4a84f85d2b9a025a80e2b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Viral EPS-Depolymerase, a Potential Tool for Control of Fire Blight Kim,W.S. and Geider,K. 2000 18944430 GenBank