Protein

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Genbank accession
QSH71727.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MGLEVATYIDQLVPTNPTGSDLKSFGDDHIRLIKRAIKNTFPNINQAVTVTAAQLNSVADTTQYVKPGMVIMWAGTLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGTSQTVGTRGGNANIVWEGLTEGHALTLAQIPAHTHTWRTRGATTLTGSAGDSGALTGGSGNAANTNLETGSAGQGQAHTHAVKINMPLGNIPPFCAVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22297,96260 Da
isoelectric point:7,86213
aromaticity:0,06047
hydropathy:-0,01628

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
61–214
SSF88874
QSH71727.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_fHoPae04
[NCBI] 		2811507 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSH71727.1 [NCBI]
Genbank nucleotide accession
MW329986 [NCBI]
CDS location
range 35754 -> 36401
strand -
CDS
ATGGGTCTTGAGGTCGCAACGTATATCGATCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCATATTCGCCTCATCAAGAGAGCCATTAAGAATACCTTCCCCAATATTAACCAAGCTGTCACCGTAACAGCAGCCCAATTGAACTCAGTCGCAGATACCACCCAATATGTGAAACCTGGGATGGTTATTATGTGGGCGGGTACTCTTGCTCAGATCCCAGCAGGTTGGAAACTTTGTAATGGCGTAGGGACAACCTCTAATGGCATCCCCGTACCTAACCTCATCGGAGCATTCCCTTGGGGTATTGATGGTACATCCCAAACTGTAGGTACTCGGGGTGGTAACGCTAACATCGTATGGGAAGGTCTTACCGAGGGCCACGCTCTTACGCTAGCCCAAATCCCAGCACACACTCACACTTGGCGTACCCGAGGGGCTACTACCCTGACTGGTTCTGCTGGTGATTCTGGTGCGTTGACTGGTGGTTCTGGTAACGCTGCCAATACCAACCTAGAGACTGGCTCTGCTGGTCAAGGACAGGCACACACCCACGCTGTTAAGATCAACATGCCCCTGGGCAACATCCCGCCGTTCTGTGCTGTATTCTTCATTATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ef30f65eaca9358ed375058791fa77d155255e543440cf4e4608a10d8fe78ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and genomic analysis of a lytic phage vB_PaeP_fHoPae04 infecting Pseudomonas aeruginosa Patpatia,S., Yilmaz,O., Ylanne,M. and Kiljunen,S. 2021-06-03 — GenBank