Protein

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Genbank accession
QDH45616.1 [GenBank]
Protein name
tail fiber protein/ lysozyme
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MASVITQFLVGISYDTEALRRGEREISTSMEGVKSLAGTTGAALSAAFIGVGATASQTAERVNNLRLNTNQLYTSTQYVNDYGNALRSLGGNATDAVSEITRVETAINNLRNKGDASTFTDLAYYGVQIDPLKNAESGGQFMERLSEQFPGLNRDQQQGVANTLGLSPATVELLRKGSDGYRDVLNHVHEVAGLSDDLIEKSRQYNAAIGEAQNRWEGVANTISSAVLPGMTDIINKGSDILSNVVAPMAERDPVATGAGLSMLGAGIAGSVAAPLLGAAGLGGVGALAGAVAPPVALAGAGTLAWNMNQQDVQNLTGAELPSWLWDKKVFDESQGDTAGGMLHSDSLLGRGYKSAGKTWQDWTSDDSVPVKDKKNKSPQGWNASDALDQDYEAQKRTYIDTSNYAPEAQVNDYNSAAAVGQAVAEKLYAVPLKATVTNNVDMRVELDGRALDSKITEVQQRNNQMTVDDMQSTTAR
Physico‐chemical
properties
protein length:477 AA
molecular weight: 50475,33940 Da
isoelectric point:4,70947
aromaticity:0,05660
hydropathy:-0,33312

Domains

Domains [InterPro]
DC_0145
STR
1–477
DC_0145
Coil
Unmapped
93–113
Coil
QDH45616.1
1 477
Architecture
STR
STR 1-477
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_AAM22
[NCBI] 		2588092 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45616.1 [NCBI]
Genbank nucleotide accession
MK798142.1 [NCBI]
CDS location
range 20734 -> 22167
strand +
CDS
ATGGCGTCAGTTATAACCCAATTCCTCGTGGGCATATCGTACGATACGGAAGCTTTGCGCCGGGGCGAGCGTGAAATCAGCACCTCCATGGAGGGTGTTAAATCACTCGCTGGTACCACCGGTGCTGCTCTTAGTGCCGCATTCATTGGTGTTGGTGCCACAGCATCGCAGACAGCAGAACGCGTCAACAACCTGCGCCTGAACACAAACCAGCTTTACACTTCCACACAGTATGTTAATGACTACGGTAATGCTCTTCGCTCGCTCGGCGGTAATGCTACGGATGCTGTGAGTGAGATTACGCGTGTTGAGACAGCCATTAACAACCTGCGTAACAAAGGTGACGCGTCTACATTTACGGACCTTGCTTATTACGGTGTGCAGATTGACCCACTGAAGAATGCTGAATCAGGTGGTCAGTTTATGGAAAGACTATCTGAGCAATTCCCCGGGCTGAACCGCGACCAGCAACAGGGTGTTGCTAATACACTCGGCTTATCTCCCGCCACTGTGGAATTACTGCGTAAAGGTTCTGATGGTTACCGTGATGTACTGAATCACGTTCACGAGGTTGCCGGATTAAGTGATGACCTGATTGAGAAGTCACGCCAGTATAATGCTGCGATTGGTGAAGCACAGAACCGCTGGGAAGGTGTTGCAAATACTATCAGCAGTGCAGTACTGCCGGGTATGACTGATATCATTAACAAAGGCTCTGACATTCTGAGTAATGTTGTTGCACCGATGGCTGAGCGTGACCCTGTTGCCACAGGTGCAGGACTGTCCATGCTGGGTGCAGGTATTGCAGGAAGTGTGGCGGCTCCTTTGCTTGGTGCAGCAGGACTGGGTGGTGTAGGTGCGCTTGCCGGTGCAGTTGCACCACCAGTAGCGTTAGCAGGCGCTGGTACGCTGGCGTGGAATATGAATCAACAGGATGTACAGAATCTCACCGGTGCTGAATTACCATCGTGGTTGTGGGATAAAAAAGTTTTCGACGAATCACAGGGTGATACTGCAGGTGGAATGCTTCACAGTGATTCACTTCTTGGCAGAGGATACAAGTCAGCTGGTAAAACGTGGCAGGACTGGACATCTGATGATTCTGTGCCGGTAAAAGATAAAAAAAATAAATCACCCCAAGGCTGGAATGCCAGTGATGCTCTTGACCAGGATTATGAAGCGCAGAAACGTACCTATATCGACACCAGTAATTATGCACCAGAAGCACAGGTGAATGATTATAATTCAGCTGCGGCTGTGGGTCAGGCTGTTGCTGAAAAGTTGTACGCAGTACCCCTCAAAGCCACAGTGACTAACAATGTTGATATGCGTGTTGAACTGGATGGTCGTGCGCTGGATAGCAAAATTACTGAAGTGCAGCAACGCAATAATCAAATGACGGTGGACGATATGCAATCCACAACGGCGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df8e0c8c5a59f89e70aa2eb3c2a40225dcabb8de2efb68f697470477565aba02
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagM_AAM22 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank