Protein

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Genbank accession
QIG65967.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADMIRINELPVSNNPQRDDLIPIDGVDGTKAAQLVDVVKAGTDLATDIEAVAGTNTTKTMTPFTTKAAIDAKVDGHFAPSTTTITVGFGMLGGGSIANNVFINFSQQTIDSLAKADTAAQAADVSAAIAPLASKNYVDSVASSKVDKPADGSSSNLIQGDGNTKPIADFVLKSEGDLVKKTGDTMSGELSSTTSNNWRIQHPSSNTSMFHRYDGTNYYLMCSDTIDGTFNTLRPITVNYTTGKTTIGNSLQVNNGVTVASGGVNVTNGDVRGKIIHDDGGGYLNIGSYGSEYGSGYSRMWWNQTAKELSIWDGSNGNNATIKAYRFSASNAVYAGSAYMATDGNIAGSAWTGGSLYSHLGSTAMRAYPRRSDGGAMNFYWSGQSGQPTWLWGGTDGTNMYVYNPSNFSVNYAASAGNANSVGGWTQPTISNQIESRAAAYADDRIARAVLKGQGDQRIGYGAGAGTGQVGMYIDINSNGYPLIFTDRGTGRGSIQINSNSTVYNTSSDHRLKENVRQIVNYSIDISNLPEALERIFKYRWVEFDWIGTDVKKYRGIIAHEVQDVIPFAVDGEKDAVNEDGTPKHQMVDYSKMVPDVGAAVQELTLLVLKQAEEINELKKKIELLGN
Physico‐chemical
properties
protein length:627 AA
molecular weight: 67031,40320 Da
isoelectric point:5,18004
aromaticity:0,08453
hydropathy:-0,35869

Domains

Domains [InterPro]
DC_0643
STR
5–627
DC_0643
G3DSA:6.20.70.20
RBD
332–363
G3DSA:6.20.70.20 IPR030392 Coil
IPR030392
CHP
508–622
IPR030392
QIG65967.1
1 627
Architecture
STR
STR 5-627
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG65967.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,6465
Central domain 229 427 200 0,2744
C-terminal 428 627 199 0,9277
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-228
Central
229-427
C-terminal
428-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65967.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 172455 -> 174338
strand +
CDS
ATGGCAGACATGATTCGTATTAATGAATTGCCTGTATCCAATAATCCACAAAGAGACGACTTGATTCCTATCGATGGTGTTGACGGTACTAAGGCCGCTCAATTGGTTGACGTGGTTAAAGCCGGTACTGATCTAGCCACAGATATTGAAGCTGTTGCCGGAACTAACACAACCAAAACAATGACTCCTTTCACAACCAAGGCGGCTATCGACGCTAAGGTTGATGGTCACTTTGCGCCTTCTACAACCACAATCACAGTTGGATTTGGTATGCTTGGTGGCGGTTCGATTGCTAACAACGTTTTTATCAATTTCTCTCAACAGACAATTGACAGTCTAGCAAAGGCCGATACTGCCGCACAAGCTGCCGATGTTTCGGCGGCTATTGCTCCATTGGCATCGAAAAACTATGTTGATTCTGTAGCCTCTTCAAAGGTTGATAAGCCTGCCGATGGTAGTTCATCGAACCTTATTCAAGGTGATGGAAATACAAAACCCATTGCCGATTTTGTTTTGAAATCAGAAGGTGATTTGGTCAAGAAAACCGGCGATACAATGTCTGGCGAGTTGTCAAGTACAACATCTAATAATTGGCGAATTCAACACCCATCGTCTAACACATCCATGTTTCATCGTTATGATGGTACTAATTACTACCTAATGTGTTCTGATACCATTGATGGAACTTTTAACACATTAAGACCTATTACAGTAAATTACACAACTGGTAAAACCACTATTGGAAACTCACTTCAAGTTAACAATGGTGTTACGGTTGCTTCTGGTGGTGTAAATGTAACTAATGGTGATGTTAGAGGTAAAATTATTCACGATGATGGTGGTGGATATCTAAATATCGGCTCTTATGGTTCCGAATACGGTTCTGGTTATAGTCGTATGTGGTGGAACCAGACTGCTAAAGAATTGTCTATTTGGGATGGTTCCAATGGTAATAATGCTACTATAAAGGCATATAGATTTTCTGCTTCCAATGCTGTTTATGCTGGTAGTGCATATATGGCAACCGATGGTAATATTGCCGGTTCCGCTTGGACTGGTGGGAGTCTATATTCACATCTTGGTTCAACCGCTATGCGAGCTTATCCAAGACGTTCCGATGGTGGTGCAATGAACTTCTATTGGTCTGGCCAAAGTGGACAACCTACATGGCTTTGGGGTGGAACCGATGGAACTAATATGTACGTCTATAATCCATCTAACTTTTCTGTTAACTATGCGGCTTCTGCTGGTAATGCCAATTCTGTAGGTGGATGGACACAACCAACTATTTCAAACCAGATTGAAAGCCGTGCGGCTGCATATGCAGATGATAGAATTGCTAGAGCGGTTCTAAAGGGACAAGGCGATCAACGTATTGGTTATGGTGCCGGTGCTGGTACTGGTCAAGTTGGTATGTATATTGATATCAATAGTAACGGATACCCCCTTATCTTTACAGATCGTGGAACTGGTAGAGGTTCTATTCAAATAAACTCTAATAGTACAGTATATAATACAAGTTCTGATCATCGTCTTAAAGAAAACGTTCGTCAAATTGTTAATTATTCTATTGATATAAGCAATCTACCAGAAGCATTAGAAAGAATATTCAAGTATCGTTGGGTTGAATTCGACTGGATCGGAACAGATGTCAAGAAATATCGTGGTATTATTGCCCACGAAGTTCAAGATGTTATTCCATTTGCTGTTGATGGTGAAAAAGACGCTGTTAATGAAGACGGAACACCGAAACACCAGATGGTTGATTACTCTAAAATGGTTCCAGATGTTGGTGCGGCTGTACAAGAATTAACACTTCTAGTTCTCAAGCAAGCCGAAGAAATTAATGAACTTAAAAAGAAAATTGAACTTCTAGGAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b38b24cc87014707e5da695c73d02ff16e748e9216e08e221560a03fce2a884f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank