Protein

Genbank accession
YP_007675385.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,54
TF
Evidence Phold
Probability 1,00
Protein sequence
MATHDYVLDNATGANFRADINLALAAIVSNNSSATEPSTKYAYQWWADTNDGVLKIRNSANDGWVTLLQLDGTLTLEDGSNSAPALGFRDDLNTGIFSSAADTLDVTCGGTTRGSFSASGLAVTGSVTATTFVGNVDAVDGDFDGTLEADAITVAGTALSTVIAGTTLTQAAQTNITSLGTLTGLTVGGDVTFDGATTGRDIVFDRSDNALEFADNAKAKFGSSAELEIYYDGTNPIFYAGTNTVRVVADNIHFEAGDFGDEFLRCNHDGAVELYYDNSKKFETTSSGINVTGQADVDSINCTGELDLTGHLDLNSDSSRIKLGAGDDFQLYHDGSNNYIFTNNGDIIVQTDGDDIQLLASDDVIIKVQGGLETAINCIGDGAVELYHNNSKKLETNSSGVNVIGSLTVDGSAISGGGGKILQVVQQTKTDTATHSVNINQGAANFSLIMSKSITPANSSNKILVQFSISGNVEANGAHVDFVLRKTVGSTVTHPILGDSASGYTSITTGFRSGGGNQHNVGQCIYQFLDDAGTTSAITYGVAVATEGATTYRVNASGGDLSSQSWSSRQASTIVLMEVSA
Physico‐chemical
properties
protein length:581 AA
molecular weight: 60352,10120 Da
isoelectric point:4,25357
aromaticity:0,07057
hydropathy:-0,10034

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage MED4-117
[NCBI] 		889954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007675385.1 [NCBI]
Genbank nucleotide accession
NC_020857 [NCBI]
CDS location
range 27962 -> 29707
strand -
CDS
ATGGCAACGCATGATTACGTTTTAGATAATGCCACAGGTGCTAATTTTCGTGCAGATATAAATTTAGCCCTTGCAGCTATCGTAAGTAATAACTCATCAGCAACTGAACCAAGTACAAAATATGCTTATCAATGGTGGGCGGATACTAATGATGGTGTTTTAAAAATAAGAAATAGTGCAAATGATGGCTGGGTTACTTTATTACAACTTGATGGAACTTTAACCCTTGAAGATGGCTCAAACTCCGCACCCGCACTAGGATTTCGGGACGATTTAAATACTGGTATTTTTTCAAGTGCTGCTGACACTTTAGACGTTACTTGTGGAGGAACAACAAGAGGTAGTTTTAGTGCTTCTGGTTTGGCAGTTACAGGAAGTGTTACTGCTACAACCTTTGTTGGAAATGTAGATGCTGTCGATGGAGACTTTGATGGAACTCTAGAAGCTGATGCTATAACTGTTGCTGGAACAGCTTTATCAACTGTTATTGCAGGAACTACTCTTACACAAGCAGCACAAACAAATATTACTTCTCTAGGTACTCTTACAGGATTGACTGTTGGTGGGGATGTAACTTTTGATGGTGCTACTACTGGCAGAGATATTGTTTTTGACAGATCAGATAACGCATTAGAGTTTGCTGATAATGCTAAAGCTAAATTTGGTTCTTCTGCAGAGCTTGAAATTTATTATGATGGAACGAATCCTATCTTTTACGCTGGCACAAATACTGTAAGAGTAGTTGCTGACAATATACATTTTGAGGCTGGAGATTTTGGAGATGAATTTCTTAGATGTAATCATGATGGAGCAGTAGAGCTATATTACGACAACAGCAAAAAATTTGAGACAACCAGTTCTGGAATAAATGTTACTGGACAAGCTGATGTTGATAGTATTAATTGTACTGGTGAGTTAGATTTAACTGGACACCTTGATTTAAACTCTGACAGCTCCAGAATTAAACTCGGAGCTGGGGATGATTTTCAGCTATATCACGATGGTAGTAATAACTACATTTTTACTAACAATGGCGATATAATTGTGCAGACTGATGGTGATGACATTCAGTTATTAGCTAGTGATGACGTGATAATAAAAGTTCAAGGAGGTCTTGAAACTGCAATCAATTGTATTGGTGACGGTGCAGTAGAGCTATATCATAACAACAGTAAAAAATTAGAAACCAACAGTTCTGGCGTGAATGTTATTGGGAGCTTAACCGTTGATGGTTCAGCTATAAGTGGTGGTGGTGGAAAAATTTTACAAGTAGTTCAACAAACTAAAACTGACACTGCCACTCATTCTGTAAATATAAATCAAGGTGCAGCAAATTTTTCTTTAATTATGAGCAAATCAATTACACCCGCAAATTCATCAAACAAAATTCTTGTTCAATTCAGTATTTCAGGTAACGTAGAAGCTAACGGTGCGCACGTTGATTTTGTGTTAAGAAAAACAGTAGGAAGCACAGTCACACACCCAATTTTAGGAGACAGTGCAAGCGGATATACCTCAATTACAACTGGTTTCAGAAGTGGAGGAGGAAATCAACATAATGTCGGACAATGTATTTATCAGTTTTTAGATGATGCTGGAACAACATCTGCTATAACTTATGGTGTCGCAGTCGCTACAGAGGGGGCAACAACTTATAGGGTTAATGCAAGTGGTGGTGATTTAAGTAGCCAATCTTGGTCATCAAGACAGGCCAGTACTATAGTATTAATGGAGGTTTCAGCATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6e4fa7a12e998aecea38614d9606c91df886ac4185ba9f5ec8dddd35a8afdaa8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7680
Evidence 0,7680
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage MED4-117 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank