Protein

View in Explore
Genbank accession
QHR74520.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITMGDVLKAFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNTFSRNQNIQSDGNALRLRNQIANNAQYIEGVNLDGSARWWVGIGSNGEDAVSLYNSKYNSAVIVASNISVNKSLAITGQVQPSDFSNLDARYFTQTAANQRFAQLVGNNTFSGLNTFSNNVNVNSDGAAIILKNKTANDTLFILARDSENNNLWYIGKGDVTSNITIYDYNGDTSIKLNASGVTFNKGVKITGQVQPSDWTNIDSRYVLIGSYANLAKKNEANTFTLQQNIQSDGEALRIYSKAQNNSSYIVGKNTDNTNKWFIGCGTNGSGTASFHNYLTGARLDLADEILLSKSLQITGQVKPSDWSNLDARYFTQSAANQRFMVAGSTGEATEQNADGVAWNAKTGLYNVTSPNGDYTSLVFQMYQGVSSSTACAQLKFQYKNGGMWYRTSVDSKGFEAKWSKVYTEAQKPTPSELGAYTKAETNQKIAQAVSDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFYATTSSFDYGTKNTNTTGAHTHSVSGSTSSAGHHNHAISWIGQNSTHYSGGGGGRIGTGPGYTDGGGDHTHSVSGTATSAGDHAHSVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:783 AA
molecular weight: 84087,51890 Da
isoelectric point:8,14199
aromaticity:0,09068
hydropathy:-0,43448

Domains

Domains [InterPro]
DC_0032
ATT
1–266
DC_0032 G3DSA:6.20.80.10 DC_1993
G3DSA:6.20.80.10
STR
157–218
G3DSA:6.20.80.10 DC_1993 G3DSA:6.20.80.10 IPR022246 IPR051934
IPR048388
ATT
158–247
IPR048388 IPR048388 IPR048388
QHR74520.1
1 783
Architecture
ATT
STR
ATT
STR
ATT 1-363 | STR 364-380 | ATT 381-471 | STR 472-779 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR74520.1
1 783
Domain Start End Length (AA) Confidence
N-terminal 1 64 64 0,9947
Central domain 65 264 201 0,2265
C-terminal 265 783 518 0,7864
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-64
Central
65-264
C-terminal
265-783

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage warpig
[NCBI] 		2696461 Uroviricota > Caudoviricetes > Andersonviridae > Felixounavirus > Felixounavirus warpig
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR74520.1 [NCBI]
Genbank nucleotide accession
MN850637.1 [NCBI]
CDS location
range 79437 -> 81788
strand +
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATTGATACAATTCGTTCAGACGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGTTGGGCGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTAGAAAGGTTTGTCCAGATTGCTGGTAGCACTATGACGGGTGACTTAGGAATTGTCAAGTTACTTTATGGTGGTAAGGCAGTGTTTGACCCTACAGGCTCTTCTGAGATTACTATGGGGGATGTTTTAAAGGCTTTTAAAATCAATGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCTGCAACCGTTTATCATACTCTGAATAAGCCAAGCCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGATATGCAAGGTTGGCTGTAACAAACACATTCTCTAGAAATCAGAACATTCAAAGTGATGGTAATGCACTTCGCCTTAGAAACCAGATTGCAAATAATGCACAATACATTGAGGGTGTAAACCTAGATGGTTCAGCTAGATGGTGGGTTGGTATTGGTAGCAATGGCGAGGATGCAGTAAGCCTGTATAACAGCAAATACAACTCAGCAGTGATTGTTGCAAGCAATATCTCTGTTAATAAGTCTTTAGCAATCACTGGTCAAGTTCAGCCTTCTGACTTCTCTAACTTAGATGCTAGATACTTTACTCAGACAGCAGCTAATCAGAGATTTGCGCAGTTAGTTGGTAATAATACCTTCAGTGGTTTAAACACATTCAGTAATAATGTTAATGTGAACTCTGATGGTGCTGCTATCATTCTAAAAAATAAAACGGCCAATGATACTCTGTTCATCCTAGCAAGAGACAGTGAAAACAATAATTTGTGGTATATTGGTAAAGGTGATGTAACCTCTAATATCACGATTTATGATTATAATGGTGACACTTCTATTAAATTAAACGCGTCTGGTGTAACATTTAATAAGGGTGTAAAAATCACTGGTCAAGTACAACCTTCTGATTGGACTAACATTGACTCTCGTTATGTTCTTATTGGTTCATACGCAAATCTTGCTAAGAAGAATGAAGCTAACACATTCACTTTACAGCAGAATATTCAATCTGATGGTGAAGCATTAAGAATCTACAGCAAGGCTCAGAATAATTCTTCTTACATTGTTGGTAAGAATACTGATAACACAAATAAGTGGTTTATCGGTTGTGGTACTAATGGTTCTGGTACGGCATCATTCCATAACTACTTGACTGGTGCAAGACTCGATTTAGCTGACGAAATTCTTCTGTCTAAATCTCTACAGATTACTGGACAGGTAAAACCTTCTGATTGGTCTAACTTAGATGCTAGATACTTCACTCAGTCAGCAGCTAATCAGAGATTCATGGTTGCAGGTTCTACAGGAGAAGCTACAGAGCAGAATGCAGATGGTGTGGCATGGAACGCTAAAACAGGCTTATATAATGTAACATCACCAAATGGTGATTACACATCACTTGTATTTCAAATGTATCAGGGAGTGTCCTCTTCTACTGCCTGTGCGCAACTAAAGTTCCAGTATAAAAATGGTGGGATGTGGTACAGAACATCTGTAGACAGTAAAGGTTTTGAGGCTAAGTGGTCTAAGGTTTACACAGAGGCTCAGAAACCAACCCCTTCAGAGCTTGGTGCATACACTAAAGCTGAAACTAACCAGAAGATTGCACAGGCAGTAAGTGACTCTACAGACCTTAACAAAATCTATCCAGTGGGTATTGTGACGTGGTTTAACAGTAATGTTAACCCTAATACAGCACTGCCTGGTCTAACTTGGACGTATCTGAACAATGGTGTTGGTAGAACTATCAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGACTCTGTGACGTTAGCTGTTGGGAACTTGCCTTCACACACTCACAGTTTTTATGCGACTACCTCATCGTTTGACTACGGAACAAAAAACACTAACACGACTGGTGCTCACACCCACTCTGTGAGTGGTTCTACTTCATCTGCTGGTCACCACAACCACGCTATCTCGTGGATTGGTCAGAACTCTACACACTATTCTGGTGGTGGTGGTGGTAGAATCGGTACAGGTCCGGGTTACACTGATGGGGGTGGTGACCACACCCACTCTGTAAGTGGTACTGCTACTTCTGCTGGTGACCATGCTCACAGTGTTGGTATTGGTGCTCACAGTCATACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTATAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b7bffbf16dc6efcaacd05ae0322ca26dff21f375baf9d765899097a686cba15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6916
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank