Protein

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Genbank accession
XZP49836.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMSTYDGYVTAVNGLTVELSQPVKFTSGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSSGFDNGFN
Physico‐chemical
properties
protein length:248 AA
molecular weight: 27651,71310 Da
isoelectric point:9,09625
aromaticity:0,11290
hydropathy:-0,46976

Domains

Domains [InterPro]
DC_0016
STR
1–248
DC_0016
NF040662
Unmapped
3–228
NF040662
XZP49836.1
1 248
Architecture
STR
STR 1-248
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZP49836.1
1 248
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,9810
Central domain 95 237 144 0,5446
C-terminal 238 248 10 0,0824
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-237
C-terminal
238-248

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GF04
[NCBI] 		3458938 Viruses >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZP49836.1 [NCBI]
Genbank nucleotide accession
PX241559 [NCBI]
CDS location
range 2815 -> 3561
strand +
CDS
ATGGGCCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATGCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCGGTGTCGTTTACCGCCACTGAAGAGGGTATTTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGTCTACTTACGACGGCTACGTAACCGCGGTTAACGGTCTTACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTATTTGGTTCTGAAGTTACGTGATGGCGGAGTCCAAAGTGTTCGTGTTGTCCCTGGCGCACATGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGCGCGTTCTCCAGCGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
527b9fda045a1fca551570cd57a62d8c55381093b0af4cb3e5e68076280f37dc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8618
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50