Protein

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Genbank accession
YP_010065304.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYASKVTFNAGVQVPYAINNTNPCGIYPGNGDNATFAVANIDIVSWNGIGFKSSQGSADRTVVINARNGDISTKGVVTAVGQIRSNAVSPVAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23425,56520 Da
isoelectric point:6,71095
aromaticity:0,09502
hydropathy:-0,29864

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
YP_010065304.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010065304.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,4998
Central domain 103 210 109 0,1550
C-terminal 211 221 10 0,9540
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CroM_CrRp10
[NCBI] 		2079276 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Citrobacter rodentium
[NCBI] 		67825 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010065304.1 [NCBI]
Genbank nucleotide accession
NC_054899 [NCBI]
CDS location
range 129827 -> 130492
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACCGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAACCACAAGCTGCAGATAACGATTTCGTTTCTAAAGCTAACGGTGGTACTTATGCATCAAAGGTAACATTTAATGCTGGTGTTCAAGTACCATATGCTATAAACAATACAAACCCATGCGGTATTTATCCAGGTAACGGTGATAATGCTACTTTTGCTGTAGCAAATATCGATATTGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCAGCAGACCGAACTGTTGTAATTAATGCACGTAATGGTGATATTAGTACAAAAGGCGTCGTGACAGCAGTAGGTCAAATAAGAAGTAATGCAGTTTCTCCTGTAGCAGCGAATGACCTTACTAGAAAAGACTATGTTGATGGAGCAATAAATACTGTTACGGCAAATGCGAACTCTAGAGTGTTACGATCTGGTGACACTATGACGGGTAACTTAACCGCACCAAACTTTTTCTCGCAGAATCCTGCATCTCAACCTTCACATGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae2f5ecba848a392c31bb71cce04da0864ca0b2ada0d0e21040fc1e8d0ff1f82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Citrobacter rodentium phages Mizuno,C.M., Debarbieux,L. and Roach,D.R. 2008-04 — GenBank