Protein

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Genbank accession
UTQ79853.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIPTITPYGGVVANPDGSQTQTEFTQNMFDQLSYEAQLASELNATVNATNTTASEVDGNAAIAQNSSDAAQAAANFEGDFTAGVTSAVKGKSYLYGGNVWLCLQNTTSTPSTSNAAWKLSVGEQYVTEAQEDLLPPGSKLFKGSDGVTVKNGDTVPVGTTHLRVLVGGLPTILVAWDTLTLPATITSIPISDNGLGGYDVVTDQGTFEFISLENYKYRLESDIRGWGAIEGGDLTDAIDAAREYKDIAVIPFSGGTTGQSDVNVNSTYVFKEKSELTITTNDTVAIPIPRNDLRVERRAVKDAWIKGNDQRNNTSTNRDGIVDEGSLNLSIERPFIRDLRYGIHQKRSMETSISDAVLQTCYAGLILENDASDGGANAQYYNVFRLQGNTVGTLVRKNASGFPMHNIFFSNVLAQAQRGCGLAIIAPTSGGRDLTTVSMSNFHFELNALDGVGDKTVDGTVVPNCDFYVSGGVNAILRDGEFSSSLTGGSLILANGAKVFADNVTGWGGGLPVTDDGTCTYHETGNCDLTRAFEVFMVNYGRPIFIRGATRYGVPKVFSNRSISNNYIGANNDPMVPEGLTTGGSTQTSVLLSNGWTVRQITFAASPGSAGGNFFRIPSGAILANSSQINTALVMSDVDAEFSFGDIQSGGFIGTAKLKAGVWTRLVMIATTDGTPPSDRKLYIWPNGSEGAVLNVTALQMTDGTTEDVANVYENCLFNPLGGDLL
Physico‐chemical
properties
protein length:727 AA
molecular weight: 77140,82180 Da
isoelectric point:4,57846
aromaticity:0,08253
hydropathy:-0,14127

Domains

Domains [InterPro]
DC_0194
STR
9–726
DC_0194
IPR011050
STR
235–446
IPR011050
UTQ79853.1
1 727
Architecture
STR
STR 9-726 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UTQ79853.1
1 727
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9930
Central domain 234 552 320 0,9810
C-terminal 553 727 174 0,9576
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-552
C-terminal
553-727

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VnaS-L3
[NCBI] 		2961683 No lineage information
Host Vibrio natriegens
[NCBI] 		691 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UTQ79853.1 [NCBI]
Genbank nucleotide accession
ON714422.1 [NCBI]
CDS location
range 5913 -> 8096
strand +
CDS
ATGGCAATTCCAACTATAACGCCTTACGGTGGCGTGGTGGCAAATCCTGACGGTAGCCAGACGCAAACTGAATTCACACAAAACATGTTTGACCAGTTGAGTTATGAAGCGCAACTTGCAAGCGAATTAAACGCAACTGTTAATGCAACTAACACGACAGCTTCAGAAGTTGATGGTAATGCAGCAATAGCACAAAACTCGTCAGACGCAGCGCAGGCAGCAGCCAACTTTGAAGGAGATTTTACCGCTGGCGTAACTAGTGCTGTTAAAGGTAAGTCATACTTATATGGTGGCAATGTTTGGCTTTGCTTGCAGAATACAACGTCAACACCATCAACTAGCAATGCAGCGTGGAAACTTTCAGTTGGTGAGCAATATGTAACTGAAGCACAAGAGGATTTATTACCGCCTGGTTCAAAGTTATTTAAGGGTAGTGATGGCGTTACAGTTAAAAACGGTGATACAGTACCAGTAGGAACAACACACCTTCGTGTGTTGGTTGGTGGTTTGCCTACTATTTTAGTTGCATGGGACACACTGACACTACCAGCAACAATTACATCAATTCCAATTTCAGATAATGGTCTTGGTGGTTACGATGTAGTTACAGATCAAGGAACGTTTGAATTTATAAGTTTGGAAAATTACAAATATAGATTAGAAAGTGATATTCGTGGATGGGGTGCTATTGAGGGTGGGGATTTAACCGATGCTATAGATGCTGCTAGAGAATATAAGGATATCGCGGTAATACCGTTTTCAGGAGGCACTACAGGTCAGTCAGATGTAAATGTAAACAGTACCTACGTTTTCAAAGAAAAATCAGAATTAACTATTACAACAAATGACACTGTGGCCATTCCGATTCCGCGCAACGATTTACGTGTAGAGCGTAGAGCGGTCAAAGATGCATGGATTAAAGGTAACGACCAGAGAAATAACACATCAACAAATCGTGACGGGATAGTTGATGAAGGTTCATTAAATCTGTCTATTGAAAGGCCTTTTATAAGAGATTTGCGATATGGTATTCACCAAAAAAGGTCAATGGAAACCTCAATATCTGACGCTGTATTACAGACGTGTTACGCAGGTTTGATACTAGAAAATGATGCATCAGATGGTGGGGCAAACGCTCAATATTACAATGTATTTAGATTGCAAGGCAATACGGTTGGAACTTTAGTTAGGAAAAACGCATCTGGATTTCCGATGCACAACATATTTTTCAGTAATGTCTTAGCTCAAGCGCAAAGGGGCTGTGGATTAGCAATAATTGCACCGACGTCAGGTGGTCGAGATTTAACCACTGTGAGTATGTCAAATTTTCACTTTGAATTAAATGCCCTTGATGGAGTTGGCGATAAGACTGTAGACGGAACTGTGGTTCCGAATTGTGACTTTTACGTAAGTGGTGGAGTTAATGCAATCTTACGGGATGGTGAGTTCTCGTCCTCTCTTACAGGTGGTTCATTAATCCTAGCTAATGGTGCAAAGGTTTTTGCTGATAATGTGACAGGTTGGGGCGGTGGCTTGCCAGTGACCGACGATGGAACTTGCACATACCACGAAACAGGTAATTGTGATTTAACTAGAGCGTTTGAAGTATTTATGGTTAATTATGGTAGACCGATATTTATACGTGGAGCAACTAGATACGGCGTTCCGAAAGTCTTTAGTAATAGATCTATAAGCAACAATTACATTGGCGCAAATAACGACCCAATGGTTCCAGAGGGTTTAACAACAGGTGGTTCTACACAGACGTCTGTTCTTCTATCTAACGGTTGGACGGTTAGACAAATAACATTTGCAGCATCACCGGGTAGTGCTGGCGGTAACTTTTTTAGAATACCCTCCGGCGCTATATTAGCTAACTCCAGTCAAATAAACACAGCATTGGTTATGTCTGATGTTGATGCTGAATTTAGTTTTGGTGACATCCAATCTGGCGGGTTTATTGGTACAGCTAAACTGAAAGCCGGAGTTTGGACGCGGTTAGTAATGATAGCAACAACTGATGGAACTCCACCTAGTGACAGAAAGTTGTATATCTGGCCTAATGGTAGTGAAGGAGCTGTTCTTAATGTAACAGCGTTACAAATGACAGATGGCACTACTGAAGACGTTGCAAATGTTTACGAAAATTGTCTATTTAACCCATTGGGAGGTGATTTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a27f957151a967c5cf3486eb8f58455037739ca5dfa4de7ad813b0dc4dee62e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel vibrio-infecting phage, and its potential therapeutic application in abalone aquaculture Lu,L., Li,X. and Dang,H. 2022-11-17 — GenBank