Protein

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Genbank accession
WDS62037.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MFEALLSGKGTPIPPETGDVIFYVDMATLTETIRGHAVSVANGAVVDNTFLIDGKPTLKMPTAGGTTGSRLRVSLSPALDLSGTNWTIEWSTYYVTAPGTWANDFYLTESTYYKGVMSRFADSGWNGLMMFADNSTNNVSTARVNLSPGALAGQLHRYAITCRAGRIRYYINGQLVGMRAGTNSNPGAFGEYFDVQTVNNFANLTQLNIGGFAGAAVNTSRYIGNVRISNFVRYNGNYTPVPF
Physico‐chemical
properties
protein length:243 AA
molecular weight: 26254,20210 Da
isoelectric point:8,64316
aromaticity:0,11934
hydropathy:-0,08642

Domains

Domains [InterPro]
IPR013320
STR
20–233
IPR013320
G3DSA:2.60.120.200
STR
27–236
G3DSA:2.60.120.200
IPR013320
STR
32–233
IPR013320
WDS62037.1
1 243
Architecture
STR
STR 20-236 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS62037.1
1 243
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,2463
Central domain 69 232 165 0,1929
C-terminal 233 243 10 0,9821
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-232
C-terminal
233-243

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage D6
[NCBI] 		3025445 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. tomato str. DC3000
[NCBI] 		223283 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS62037.1 [NCBI]
Genbank nucleotide accession
OQ363659 [NCBI]
CDS location
range 13217 -> 13948
strand +
CDS
ATGTTTGAAGCACTATTAAGTGGAAAGGGTACGCCTATCCCACCTGAAACAGGGGACGTGATTTTTTATGTAGATATGGCTACGTTAACTGAAACAATTCGTGGCCATGCGGTGTCAGTCGCCAATGGTGCAGTTGTGGATAATACATTTTTAATTGATGGGAAACCAACATTGAAAATGCCGACAGCTGGTGGTACAACAGGTTCGCGTCTACGTGTCAGCCTCTCCCCAGCATTGGATCTCTCTGGTACTAACTGGACAATTGAATGGTCAACCTATTATGTTACCGCACCAGGTACATGGGCGAATGACTTCTATTTAACAGAAAGCACCTACTATAAAGGTGTCATGTCTCGGTTTGCAGACTCTGGTTGGAACGGATTAATGATGTTTGCGGATAACTCCACGAACAACGTTTCTACCGCTAGGGTTAACCTCTCACCTGGTGCACTTGCTGGGCAGTTACACCGGTATGCAATCACTTGTCGTGCAGGCAGGATTCGTTACTATATCAACGGTCAATTGGTTGGTATGCGGGCAGGTACAAACTCTAACCCTGGTGCCTTCGGGGAATACTTCGATGTGCAGACAGTGAACAACTTTGCTAACTTAACACAGTTGAATATTGGTGGTTTTGCAGGTGCCGCTGTTAACACCTCACGTTACATCGGTAACGTACGGATCAGTAACTTCGTGCGTTATAATGGAAACTACACGCCAGTACCGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d654965bcfbe6547297b1ed51908ef7413951cf0178c6507c59ee1b6fc565dba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7604
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50