Protein

Genbank accession
AGH31657.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 0,61
Protein sequence
MRGKNKMPLNLASPGIVVREVDLTVGRVDPTSGGIGAIVAPFAQGPVDLPTVIGSEKDLLDVFGKPYGTDKHYEHWLVASSYLAYGGSLSVVRADDTGLQNGFVGTAASIKIKSLEHYEELGYDENPITNVVVAARNPGSWANGLRVGIIDSKADQILTLSAAPAGFAVGMGVTQAISSTLPGAGTTSVLDGYLKGIVTQVAGVDAYVKVLEHVSAAGTVTEVDYQPSGVYAFSGSGSVAIHTSGQAASYATTSLTAQADWFDQQSLTLTSSSTVKWNQLADRPGTSEYAAARGSRFDEVHVVVVDGDGDITGNSGTVLEKHLSLSKAKDAEFSLGSPSYWRKYIANGSPNIFAGSAPAGIVTTGFVSGGTGFDPETDVSWDQNAEGITFAATGNSNNTLGGGWNYDGAGNIENDGALSSGLDGLVTGYGLFENTEKYNVDFILMGSAGYGKEEAQALANKCIAVAETRKDAVAFISPYRGAAITDTSDDRAVNINSDETITENVISFYSPITSTTYGIFDSGYKYMFDRFANTFRYVPLNGDIAGLCARNDANNFPWFSPAGTNRGGILNAVKLAYTPSKAQRDRLYSNRVNPVIFSPGAGIVLFGDKTGFGKSSAFDRINVRRLFIYLEDAISAAARDQLFEFNDEITRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAIIDNNEFVADIFIKPARSINFIGLTFVATRTGVSFDEVIGNV
Physico‐chemical
properties
protein length:728 AA
molecular weight: 77291,05640 Da
isoelectric point:4,74989
aromaticity:0,10027
hydropathy:-0,05934

Domains

Domains [InterPro]
IPR052042
7–712
IPR052042
G3DSA:3.40.50.11780
31–188
G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287
IPR035089
435–610
IPR035089
AGH31657.1
1 728
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SKS1
[NCBI] 		754042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH31657.1 [NCBI]
Genbank nucleotide accession
HQ633071 [NCBI]
CDS location
range 107827 -> 110013
strand -
CDS
ATGCGAGGAAAAAACAAGATGCCACTAAATTTAGCATCTCCTGGTATTGTAGTAAGAGAAGTAGACTTAACTGTCGGTAGGGTTGATCCAACCTCCGGTGGCATCGGTGCGATTGTCGCACCTTTTGCACAAGGTCCTGTCGATCTTCCTACAGTAATCGGAAGCGAGAAAGACTTATTAGATGTCTTCGGAAAACCATACGGTACAGATAAGCACTATGAGCACTGGTTAGTTGCTTCTTCTTATCTGGCATATGGTGGTTCACTTAGTGTTGTAAGAGCAGATGATACTGGTCTTCAGAACGGGTTTGTTGGTACTGCCGCAAGCATCAAAATAAAAAGTCTTGAGCACTACGAAGAACTAGGATATGATGAAAATCCTATTACTAATGTAGTTGTTGCCGCCAGAAATCCCGGTTCTTGGGCAAATGGTTTAAGAGTTGGTATTATTGATTCCAAGGCAGATCAAATTCTTACACTTTCTGCAGCACCTGCAGGATTTGCTGTTGGAATGGGAGTTACTCAAGCAATTTCTTCAACACTTCCAGGAGCAGGAACTACTTCAGTTCTTGATGGATATTTAAAAGGTATCGTCACTCAGGTTGCTGGTGTAGATGCTTATGTAAAAGTTCTTGAGCATGTCTCTGCAGCAGGAACTGTAACTGAAGTTGATTACCAACCATCCGGTGTTTATGCATTCTCTGGAAGTGGAAGTGTAGCAATTCATACTAGTGGACAAGCAGCATCATACGCGACTACTTCTCTTACTGCACAGGCAGATTGGTTCGATCAACAATCACTTACTTTAACTTCTTCATCGACTGTTAAGTGGAATCAACTTGCAGATCGTCCAGGAACTTCCGAGTATGCAGCAGCAAGAGGTTCTAGATTTGATGAAGTTCATGTTGTCGTAGTTGATGGTGATGGAGATATCACTGGAAACTCTGGAACAGTTCTTGAGAAGCATCTATCACTATCAAAAGCAAAAGATGCTGAATTCTCTCTCGGATCTCCTTCATACTGGAGAAAGTATATTGCAAATGGTTCACCTAACATTTTTGCAGGTTCGGCACCAGCAGGTATTGTAACAACTGGATTTGTTAGTGGTGGAACTGGATTCGATCCTGAGACTGATGTATCTTGGGATCAAAATGCTGAAGGTATTACCTTTGCTGCAACTGGTAATTCTAACAACACATTAGGTGGTGGTTGGAATTATGATGGAGCAGGCAACATAGAAAATGATGGTGCATTAAGTTCTGGTTTAGATGGATTGGTTACTGGTTACGGATTGTTTGAGAATACTGAAAAGTATAATGTAGATTTCATTCTTATGGGATCTGCCGGATATGGTAAAGAAGAAGCACAGGCACTTGCGAATAAGTGTATTGCAGTTGCTGAAACAAGAAAGGATGCAGTTGCATTCATCTCACCATATAGAGGTGCTGCAATTACTGATACTAGTGATGATAGGGCAGTAAACATCAATTCAGATGAGACAATTACTGAAAATGTAATTAGTTTCTATTCTCCCATCACTTCAACAACTTATGGAATCTTTGATAGTGGTTACAAGTATATGTTTGATAGGTTTGCAAATACCTTCAGATATGTTCCACTAAACGGAGACATTGCCGGACTTTGTGCCAGAAATGATGCAAACAACTTCCCATGGTTCTCACCAGCAGGAACAAATCGTGGTGGAATTCTAAATGCAGTTAAACTTGCATATACTCCATCTAAAGCACAGAGAGATAGATTGTATTCGAATAGAGTCAATCCAGTAATCTTCTCACCTGGTGCCGGTATTGTTCTCTTTGGGGATAAGACTGGATTTGGTAAGTCGTCGGCATTTGATCGTATTAACGTTCGTAGATTGTTTATCTATCTTGAGGACGCAATCTCTGCTGCGGCAAGAGATCAACTCTTTGAGTTTAATGATGAAATCACAAGAACTAACTTTGTGAACATTGTCGAACCATTCCTTCGTGATGTCCAGGCAAAGAGAGGAATCTTTGACTTTGTAGTTATTTGTGATGAGACAAATAACACTGCTGCTATTATAGATAATAATGAGTTTGTAGCAGACATCTTTATCAAACCCGCAAGATCAATCAACTTCATCGGTCTTACGTTTGTTGCCACCAGAACTGGTGTTTCATTTGATGAAGTAATCGGTAACGTTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
0537607c95b06b699f4fd5b8d98a14c80e20a78d97bd9a48ccfe820964439633
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6544
Evidence 0,6544
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-SKS1 Henn,M.R., Clokie,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank