Protein

View in Explore
Genbank accession
XKC24683.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MPEYTLTPIPDMALYVDGIPAIAPASNIGAAVLNDFYPYLLDPSTGNSVGVTLRYVHPSSSWILPNGEPALFNLGMSDENFFEIITQLKTYSKANYLVKPLGSLWGYLATDAGNFLELKPDELIEIKPQEFVKAGKEVYYISNLDNGLTLNTTIAQLGVFSLPEKKNPLQDYAWGGYVLNETPQDGKHSLWKVTYKTDTSEFFIKRADQVEQTNPLYETDVTAVGLAMDPQNRPQIVYTIAGVSNIYWYDFNLGRYNHMELPDAVNPCISDLNPNSGTEIILGYQVDNSLMYRKYSEGYQIEHTLVSNLANGLKLHQIGYADNEKFQWLLKG
Physico‐chemical
properties
protein length:332 AA
molecular weight: 37251,61440 Da
isoelectric point:4,65059
aromaticity:0,12048
hydropathy:-0,25663

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC24683.1
1 332
Domain Start End Length (AA) Confidence
N-terminal 1 113 113 0,7919
Central domain 114 321 209 0,2983
C-terminal 322 332 10 0,0774
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-113
Central
114-321
C-terminal
322-332

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Mystique
[NCBI] 		3373405 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24683.1 [NCBI]
Genbank nucleotide accession
PQ438181.1 [NCBI]
CDS location
range 22029 -> 23027
strand +
CDS
ATGCCTGAATATACCTTAACACCTATCCCAGATATGGCTTTATATGTGGATGGAATCCCAGCGATTGCCCCAGCCAGTAACATCGGGGCTGCAGTCTTAAATGACTTTTACCCTTACTTATTGGACCCCAGCACTGGCAATAGTGTTGGGGTAACGCTACGCTATGTTCATCCAAGTTCATCGTGGATTTTACCGAATGGTGAGCCAGCGTTGTTTAATTTGGGAATGTCAGATGAAAACTTCTTTGAGATTATTACCCAGTTAAAAACATATTCTAAAGCCAACTACCTTGTAAAACCTTTGGGTTCTTTGTGGGGCTACCTTGCAACGGACGCAGGTAATTTTTTAGAGTTAAAACCAGATGAACTTATTGAAATTAAACCACAAGAGTTCGTGAAAGCTGGCAAAGAAGTTTACTATATTTCTAACTTAGACAATGGCTTAACCCTTAACACAACCATAGCCCAGCTTGGTGTTTTTTCTTTGCCTGAGAAAAAGAATCCGCTTCAAGATTATGCTTGGGGTGGGTATGTGTTAAATGAAACACCACAGGATGGTAAACACTCTTTGTGGAAAGTAACGTACAAGACTGATACCAGCGAGTTTTTTATTAAACGAGCCGATCAAGTTGAACAGACTAACCCATTGTATGAAACTGATGTAACCGCAGTTGGCCTAGCAATGGACCCACAGAACAGACCACAGATTGTTTACACCATTGCTGGTGTATCAAACATTTACTGGTATGATTTCAACCTTGGTCGTTACAACCATATGGAATTACCTGACGCGGTGAATCCGTGTATTTCAGACCTGAACCCAAACTCAGGCACTGAAATTATTTTGGGCTACCAAGTGGATAATAGTTTGATGTATCGAAAATATTCAGAAGGCTATCAGATTGAACACACCTTGGTTAGCAACCTAGCTAATGGTTTAAAGTTACATCAAATTGGTTATGCTGATAATGAAAAATTTCAATGGTTATTGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6a5281b527f909bf08dbebabcdd7daca46219c80f0204e85cc30cebaaec57eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4861
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental differences impact Acinetobacter baumannii phage isolation and infectivity Alseth,E.O., Roush,C., Irby,I., Kopylov,M., Bobe,D., Nguyen,K., Xu,H., Bryksin,A.V. and Rather,P.N. 2024-07-10 — GenBank