Protein

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Genbank accession
QOI72564.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNTHIIVKVSIVKYVGANGYYLALSNTGNVYSYGTNANGQLGLGDTTQRTTWTLSATGVDDIYLNRNSNTYTSIIRKGKKLLYSGKRGAIIGDSSVSTQVLTWTEFYDLSTLTSDGSTVTDIQSSTGSIGVLLSNKNLYLTGTNLGTGSTAISPVLTLSSSNVDSFSINSTNTYIVRGSELFGTGSNAQLQISNSGTSFSTYTSITTSVSFALGGINNVYIVLLNGEIWGRGQNALISLGLSGSTGNRGLTKLMNTLILLPAKIHCWGYGAAVIGSDGIWGCGQTLYSGSSSSNQTVWTKYYPITSFSGSLIDLTGTNTSTVLHTSTGIYGAGSDLLVNQGTSISYYKLEQPK
Physico‐chemical
properties
protein length:360 AA
molecular weight: 37972,02160 Da
isoelectric point:8,86190
aromaticity:0,09167
hydropathy:0,03389

Domains

Domains [InterPro]
DC_0433
ATT
1–125
DC_0433 DC_2125
IPR009091
STR
7–349
IPR009091
IPR009091
STR
18–313
IPR009091
DC_0436
RBD
93–220
DC_0436
QOI72564.1
1 360
Architecture
ATT
STR
RBD
ATT 1-125 | STR 126-349 | RBD 350-360
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI72564.1
1 360
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,1741
Central domain 113 315 204 0,3568
C-terminal 316 360 44 0,4198
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-315
C-terminal
316-360

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_50
[NCBI] 		2768775 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI72564.1 [NCBI]
Genbank nucleotide accession
MT939488 [NCBI]
CDS location
range 355568 -> 356650
strand -
CDS
ATGTTACCATTTCCAATAATAAGTAATACACATATAATAGTGAAGGTATCTATTGTAAAATACGTTGGTGCTAATGGATATTATCTTGCTTTAAGTAACACAGGAAATGTATACTCTTATGGTACAAATGCCAATGGTCAATTAGGATTAGGTGATACCACACAGAGGACTACATGGACATTGAGTGCAACTGGAGTGGATGATATATATTTGAATAGGAACTCCAACACATACACATCTATAATACGTAAGGGGAAGAAGCTCCTATACAGTGGTAAGAGGGGTGCAATAATAGGTGATAGTTCTGTATCTACTCAAGTACTGACATGGACAGAGTTTTATGATTTAAGCACCTTAACCTCAGATGGAAGTACTGTTACAGATATACAGAGTAGTACTGGTAGTATAGGAGTATTATTAAGTAATAAGAATTTATATTTAACTGGTACAAATTTAGGTACAGGAAGTACAGCGATAAGTCCAGTACTAACGTTGAGTTCTAGTAATGTAGATTCATTTAGTATTAACAGTACCAACACTTATATAGTACGGGGTTCAGAATTATTTGGTACTGGTTCAAATGCACAGTTACAGATTTCTAACAGTGGTACATCATTTAGTACTTACACTAGTATAACGACTTCTGTATCATTTGCATTAGGAGGAATTAACAATGTATATATAGTACTTCTTAATGGAGAGATATGGGGCAGGGGTCAGAATGCATTAATATCTTTAGGTTTAAGTGGAAGTACAGGTAATAGGGGTTTAACGAAGTTAATGAATACTTTAATACTGTTACCTGCTAAGATACATTGTTGGGGATATGGAGCAGCGGTGATTGGAAGTGATGGTATATGGGGATGTGGGCAGACTTTATATTCTGGAAGTTCTTCATCGAATCAGACGGTCTGGACGAAGTATTATCCTATTACATCTTTTAGTGGATCATTAATTGATTTAACTGGTACAAACACGAGTACGGTATTGCACACGAGTACGGGGATATATGGAGCGGGTTCTGATTTATTAGTTAATCAGGGTACTTCTATATCGTACTATAAGTTAGAGCAGCCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59fab2cca7eba11b6e3eeeab9110d4f24950f1a12cb68fa7b98f1802143af625
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8640
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_50 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank