Protein

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Genbank accession
URC22642.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MSSLVNVGDDGVDIVSVSELPRASKVSDKDWIVVNVSQGAGELTTKAQLSQVFEGTVDDAKASAIAAAASAEDAKKYVDGAVGMSKPYETVAKAQAAITAGVLKEGDVFTVVSDKPGGAFDVYVAKGGVPVPVLDSNGVQVSVASAEALAEVTRLVTESLTSPLILEVLDQKDYVAMSLDKEYTLRLGGDTVVLKDGSLSAGAMTVEVDDTAPYAVNLKDADGYILDLTTPRAEEVGPVTPTEADWKQVTARNAENLGKAANVFRKKNTITQAITAQYNGVIMLGQSLSTGYEGWPALTGVESRLGNLMLGDATRPARRGSNAFEPLNNGNLNPLKAVVQTPDGTRLLTDSEVAALAPGASNEGESPIVAAVNYMKHLWLDHVGKEIDDDMVFIASDCGVAGRSIEQLRNNHWNMFTQAVDKQKAAADAAGKTFNIPVVFFMQGEWNYAANGGTSDKDAYKALLKAYRKDAVDYIISVTGQLKPPAFIMYQTGANYTGADDQLTIGRAQWEVAQEVPGCYIATTIYEQTDKGGHLQPNGYRSTGINLGWAAFQIAVLRGNFEPTHMLSAVAKDNEALVNILAPTYPIVFRDAYVGVTPTMYPTRGFLFKDGVGVLPVTSIEVLKDSVVHAVFGRKISGDLTVTYASKTSNSGNGNVADSSSNLSMYDYVYTEGTGQYPTTNIPALVNKPYSTASWCIADKITAEVIQ
Physico‐chemical
properties
protein length:707 AA
molecular weight: 75177,69060 Da
isoelectric point:4,77694
aromaticity:0,07638
hydropathy:-0,09859

Domains

Domains [InterPro]
DC_0547
STR
21–703
DC_0547
IPR036514
STR
281–562
IPR036514
SSF52266
STR
339–559
SSF52266
URC22642.1
1 707
Architecture
STR
STR 21-703 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URC22642.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 557 557 0,6356
Central domain 558 696 140 0,2365
C-terminal 697 707 10 0,9870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-557
Central
558-696
C-terminal
697-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM-Kashira
[NCBI] 		2943834 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URC22642.1 [NCBI]
Genbank nucleotide accession
ON287374.1 [NCBI]
CDS location
range 25257 -> 27380
strand -
CDS
ATGAGCAGCTTGGTAAATGTTGGCGATGACGGCGTAGACATCGTTTCGGTAAGTGAATTGCCACGTGCCAGTAAGGTAAGCGACAAAGACTGGATCGTGGTAAACGTAAGTCAGGGCGCTGGGGAGCTGACAACCAAGGCTCAGTTGAGCCAAGTGTTCGAAGGTACAGTCGACGATGCCAAGGCCTCTGCAATCGCAGCGGCCGCTTCTGCGGAAGATGCGAAGAAATATGTCGATGGTGCGGTCGGAATGTCCAAGCCATACGAGACGGTGGCAAAGGCTCAGGCAGCGATCACTGCCGGTGTCCTGAAAGAAGGTGACGTGTTCACCGTGGTTAGCGATAAGCCCGGCGGAGCCTTCGATGTTTATGTTGCAAAAGGTGGAGTCCCTGTTCCGGTTCTCGACTCAAACGGCGTACAAGTGTCAGTGGCAAGCGCCGAAGCACTTGCTGAGGTAACCCGCCTCGTCACCGAGTCATTGACCAGCCCACTGATCCTCGAGGTTCTTGACCAGAAGGATTATGTTGCAATGTCTCTCGATAAAGAGTACACTCTGCGCCTCGGTGGCGACACAGTTGTCCTGAAAGATGGATCACTATCTGCCGGTGCCATGACTGTAGAGGTCGACGACACGGCCCCTTACGCGGTCAACTTGAAGGATGCGGATGGTTACATCCTCGACCTGACCACACCAAGGGCTGAAGAAGTCGGTCCCGTGACGCCGACGGAAGCAGACTGGAAACAAGTAACGGCCCGCAACGCCGAAAACTTGGGTAAAGCAGCCAACGTGTTCCGTAAGAAAAACACGATCACTCAGGCGATTACCGCTCAGTATAACGGCGTAATCATGCTGGGTCAATCTCTGTCTACCGGTTACGAAGGCTGGCCTGCCTTGACGGGCGTTGAATCCCGCCTCGGAAACCTGATGCTGGGTGATGCAACAAGACCAGCAAGGCGCGGATCCAACGCATTCGAACCACTGAACAATGGCAACTTGAATCCACTGAAGGCCGTAGTTCAGACGCCTGACGGGACTCGTCTGTTGACAGACTCAGAGGTTGCAGCACTGGCACCGGGAGCATCAAACGAAGGTGAAAGTCCAATCGTTGCAGCGGTAAACTACATGAAGCACCTGTGGCTAGACCATGTTGGTAAAGAGATTGACGACGACATGGTGTTCATTGCGAGTGACTGTGGTGTGGCTGGACGTTCTATCGAACAATTGAGAAACAACCACTGGAACATGTTCACTCAGGCGGTGGACAAGCAGAAAGCAGCTGCCGATGCCGCAGGGAAGACGTTCAACATTCCGGTTGTGTTCTTCATGCAGGGCGAATGGAACTACGCCGCCAACGGCGGTACCAGCGATAAGGATGCTTACAAAGCCCTCCTGAAAGCTTACCGTAAAGACGCGGTTGATTACATCATCTCCGTAACTGGGCAGTTGAAGCCACCGGCCTTCATCATGTACCAGACTGGTGCTAACTACACCGGTGCAGATGACCAGCTGACGATCGGTCGTGCTCAGTGGGAAGTTGCTCAAGAAGTCCCGGGTTGTTACATTGCTACCACGATCTACGAGCAAACGGACAAGGGTGGACACTTGCAGCCGAACGGTTACCGTTCTACCGGTATCAACCTCGGATGGGCAGCTTTCCAGATCGCGGTCCTGCGTGGCAACTTCGAGCCAACCCACATGCTGTCTGCTGTGGCTAAGGACAATGAAGCACTGGTTAACATTCTGGCACCGACTTACCCGATCGTCTTCAGGGACGCATATGTTGGAGTAACGCCGACCATGTATCCAACTCGAGGCTTCTTGTTCAAGGATGGCGTAGGTGTCTTGCCAGTAACAAGCATCGAGGTACTGAAGGACTCTGTGGTTCACGCAGTCTTCGGAAGGAAGATCTCAGGTGACCTGACGGTAACTTACGCAAGTAAGACCAGTAACTCAGGCAACGGGAACGTTGCTGACAGCTCTTCGAACTTGAGCATGTACGACTACGTCTACACCGAAGGTACAGGACAGTACCCGACAACCAATATTCCTGCCTTGGTCAATAAGCCCTACAGTACGGCGAGTTGGTGCATTGCAGATAAAATCACTGCGGAGGTAATTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a3a6180fa9f7fedec98b181eaea72c3caa55a2122825a5eee0c101c3291fa95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50