Protein

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Genbank accession
YP_009597501.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MLYSLMRESRVVIEYDGRAYGFDALSDYTAGTSYEEFKANRRTIHRRSNYAYSKITAQSPSSISLTLNFSSNALEGLFFELMGFIEIDGMYQMPLFSNNIEPKMFSVYIINKNTSLRFDNCFATTCDFSLDKSVPVLNVGIESGYFEEVGHPLNSYTLDQGEVLPFSLPQVSSNGRVLPGLMSAGMSFQQQCEWRGDRSLFDINKIYNNRRAIVNELNSSALISMYYAKSLHIDSTHNIKPDMGLPVQIRNKYIVVDFPSTKITKRLDLTDVYKIDYDVIPTEQSDPVRIKLIGE
Physico‐chemical
properties
protein length:295 AA
molecular weight: 33586,74760 Da
isoelectric point:5,50795
aromaticity:0,11525
hydropathy:-0,24237

Domains

Domains [InterPro]
IPR056389
ATT
1–294
IPR056389
YP_009597501.1
1 295
Architecture
ATT
ATT 1-294 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009597501.1
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,6534
Central domain 287 286 1 0,6160
C-terminal 287 295 8 0,6349
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-286
C-terminal
287-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn_IME260
[NCBI] 		1912318 Uroviricota > Caudoviricetes > Demerecviridae > Sugarlandvirus IME260 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009597501.1 [NCBI]
Genbank nucleotide accession
NC_041899 [NCBI]
CDS location
range 99694 -> 100581
strand -
CDS
ATGCTATACTCCCTAATGCGGGAGTCTAGAGTAGTCATCGAGTACGATGGCAGGGCGTATGGATTTGACGCCCTGTCTGATTACACTGCTGGAACGTCCTACGAAGAGTTTAAAGCAAATCGTAGGACGATTCACAGACGCAGTAACTACGCCTATTCGAAGATAACTGCTCAGTCTCCTTCTTCAATTTCTCTAACTCTTAACTTCTCTAGCAATGCTCTCGAGGGTCTATTTTTCGAGTTGATGGGGTTTATAGAGATAGACGGAATGTATCAGATGCCCTTGTTCAGTAATAATATTGAGCCTAAAATGTTCTCCGTATATATTATTAACAAGAACACGAGCTTACGTTTCGATAACTGTTTTGCTACCACCTGCGACTTTTCTCTAGATAAGAGTGTCCCGGTGCTAAACGTTGGTATCGAGTCGGGATACTTTGAGGAAGTAGGCCACCCACTCAACAGCTATACGCTTGATCAAGGTGAGGTGCTACCATTTTCATTACCTCAGGTATCTTCGAATGGGAGAGTGCTCCCAGGGCTTATGTCAGCCGGTATGTCATTCCAGCAGCAATGTGAATGGCGGGGTGACAGAAGTTTATTCGATATCAATAAGATTTATAATAATAGGAGAGCAATCGTTAACGAGTTGAACTCATCTGCTTTGATATCGATGTATTATGCGAAGAGTCTTCATATAGATTCTACGCATAACATTAAACCTGATATGGGCCTACCGGTACAGATCAGAAATAAATATATTGTGGTGGACTTTCCATCCACTAAAATCACAAAACGCCTAGACTTAACCGACGTGTACAAGATCGATTACGATGTGATCCCTACGGAGCAATCAGATCCTGTCCGAATCAAGCTAATTGGAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
574df436d7c2a54af110e8607b1114ce12afe4657cd463bb04aaa3b9a63a41ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of two Novel Multi-drug resistant Klebsiella pneumoniae Phage vB_Kpn_IME260 Xing,S., Pan,X., Sun,Q., Pei,G., Mi,Z., An,X. and Tong,Y. 2017-05-11 — GenBank