Protein

View in Explore
Genbank accession
YP_009835873.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MATTDLSVIKIKNLSNRASVLETDELIIQSSTDTEKTTISKFITDIDILRKSEMTGSSGASVVGTHSGATVQQALDSLSNSLQNIAGNYYFSSSGNEVGANVDTLSLSPSERTYGVQISVPSAAFSPKTDNRISNGTTNLRWSQVYAVNSVISTSNKKKKTNLRQISIAETRAFYEIGKLDSVWQWLAKYSSEKGAARLHSGPTVQDAMRVMLKHGLDWTKYSAFCYDKWEADGDRPAGEEYAFRKEELLFWVLRATIAMQEDLDKRLSVLEESLSGN
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30676,95870 Da
isoelectric point:6,00529
aromaticity:0,07914
hydropathy:-0,39029

Domains

Domains [InterPro]
DC_0783
STR
2–255
DC_0783
IPR036388
RBD
141–236
IPR036388
IPR030392
CHP
155–275
IPR030392
cd10144
CHP
155–259
cd10144
IPR030392
CHP
155–216
IPR030392
YP_009835873.1
1 278
Architecture
STR
CHP
STR 2-255 | CHP 256-275 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage Ro1
[NCBI] 		2053702 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus Ro1 >
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835873.1 [NCBI]
Genbank nucleotide accession
NC_048682 [NCBI]
CDS location
range 115081 -> 115917
strand +
CDS
ATGGCAACAACTGATCTCTCTGTAATAAAGATAAAAAATCTTTCTAACAGGGCCTCGGTGTTGGAGACAGATGAATTAATCATCCAGTCCTCCACAGACACTGAAAAAACCACGATAAGTAAATTCATTACGGATATTGATATCCTTAGAAAAAGTGAAATGACAGGCTCTTCCGGGGCTTCTGTTGTGGGAACACATTCCGGAGCAACTGTTCAACAAGCACTTGACAGTCTTTCAAATAGCTTACAAAACATAGCTGGTAATTATTATTTCTCTTCTTCAGGAAATGAGGTAGGTGCTAATGTAGACACGTTATCCTTAAGTCCTTCAGAGAGAACTTATGGAGTCCAGATATCTGTCCCTTCAGCGGCATTCTCTCCGAAAACAGACAATCGGATATCTAATGGTACTACTAATCTTAGATGGAGCCAAGTTTACGCAGTAAATAGCGTAATTTCTACCTCTAATAAGAAAAAGAAAACTAATCTCCGCCAGATCTCCATCGCAGAGACTAGAGCTTTTTATGAGATTGGGAAATTAGATTCGGTTTGGCAATGGTTGGCTAAATACTCATCTGAGAAAGGCGCAGCAAGACTTCATTCTGGCCCTACCGTTCAAGATGCAATGAGGGTGATGCTAAAGCATGGTCTCGATTGGACGAAATATTCAGCATTCTGCTACGACAAGTGGGAAGCAGATGGTGATAGGCCAGCAGGCGAGGAGTACGCCTTTAGAAAAGAGGAGTTGTTGTTCTGGGTATTGCGGGCAACTATTGCGATGCAGGAGGACTTGGATAAGCGCCTTTCAGTCTTGGAAGAGTCTTTGTCCGGCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7746e714c8dfe208aa7598b20c1694272678f911835cca8d68f97f9f6f6ef1a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank