Protein

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Genbank accession
UUJ74859.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIQRLGSSLVKMPNGITLTQWLQPANIIKVDDAPYNGDLIAAYNAIPVIGNYALVLTNHTYNAVGLFDAGRNMKPNITIIGAGMPQLADDRSSFVEGSGTIIKGAVKNSAKGFQIGNLGIDCGNTVSRTYYQPARFEDPLQIYGCGANANIFIDNVKCLSAVSVDERPGTHSILLEQTEGVTLGYVECIGGFHGLTIKCRNLRGGIAHCYGQYGDGFIIKSDAGGAASHIYMERIQVGHPDQSMWPDVHLGGIYDAHDGVTIDSVSIGELHVVRGTWGLIPADNATGNITNFHIGHYECHLTYGNYYSLVINNKVVGWTMGTHNITNCSGGIKVDPASVYVNIGTGRSTNNTESGYSLGGNTLIHGELIADANGKYGVEYSGGLGLDVSKIHGFQNPLGTYSGYSSAIQSLLWPDAGFEAMVTGRTVTLRGSLTKGTTAWCGQVLDAVKPTRDIRIYAWAVGLGGSMVPVEAWIRSANGAIDVVGKDSVGEGQIVSFTGSYIFK
Physico‐chemical
properties
protein length:504 AA
molecular weight: 53598,89090 Da
isoelectric point:5,99296
aromaticity:0,08730
hydropathy:-0,00992

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUJ74859.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 35 35 0,9473
Central domain 36 394 360 0,9939
C-terminal 395 504 109 0,9912
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-35
Central
36-394
C-terminal
395-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp03
[NCBI] 		2969991 No lineage information
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUJ74859.1 [NCBI]
Genbank nucleotide accession
OP038547.1 [NCBI]
CDS location
range 26080 -> 27594
strand -
CDS
ATGATACAAAGATTAGGTTCTTCCTTAGTGAAGATGCCAAATGGTATTACATTGACACAGTGGTTGCAACCTGCAAACATCATCAAGGTAGATGATGCACCATACAATGGAGACCTTATTGCTGCATATAATGCTATTCCAGTTATAGGTAATTATGCTTTGGTTCTTACCAACCACACTTACAATGCAGTTGGTTTGTTTGATGCAGGTCGTAACATGAAGCCTAACATCACCATCATTGGTGCTGGTATGCCTCAACTTGCAGATGATAGGTCGTCATTTGTTGAAGGTTCTGGCACTATCATTAAAGGCGCAGTCAAGAACTCCGCCAAGGGCTTCCAGATTGGTAACCTAGGTATTGATTGTGGTAACACAGTTAGTCGTACATACTACCAACCTGCACGCTTCGAAGACCCACTACAGATATACGGGTGTGGCGCTAATGCTAACATCTTTATCGATAACGTGAAGTGCCTTAGTGCAGTTTCTGTAGACGAGAGACCGGGAACACACAGCATTCTGCTTGAGCAAACTGAAGGTGTTACTCTCGGATATGTAGAGTGCATTGGTGGCTTCCACGGACTTACCATCAAGTGCCGTAACCTACGTGGCGGGATTGCACATTGCTATGGCCAGTATGGTGATGGCTTCATCATCAAATCTGACGCTGGTGGTGCAGCGAGTCATATCTACATGGAGCGAATTCAGGTAGGACACCCAGATCAGTCTATGTGGCCTGATGTGCACTTGGGTGGTATCTACGATGCGCACGATGGTGTAACCATTGATAGTGTTAGCATTGGTGAGTTGCATGTTGTACGAGGAACTTGGGGTCTGATACCTGCTGATAACGCCACTGGCAATATCACCAACTTCCATATTGGACATTATGAGTGCCACCTTACTTACGGCAACTACTACTCCCTTGTTATCAACAACAAGGTTGTAGGTTGGACTATGGGTACTCACAACATCACGAACTGCTCAGGTGGTATCAAGGTAGACCCTGCATCAGTGTATGTGAACATAGGTACTGGTCGCTCTACAAACAACACTGAAAGTGGGTACTCTCTTGGTGGCAACACCTTGATTCATGGTGAACTGATTGCAGATGCGAATGGTAAGTATGGTGTAGAGTATTCTGGTGGTCTAGGTCTTGATGTAAGTAAGATTCATGGATTCCAGAATCCACTTGGTACTTACTCAGGGTACTCTTCTGCTATCCAATCCCTACTGTGGCCTGACGCTGGGTTTGAAGCGATGGTTACAGGGCGCACTGTGACATTGCGTGGGTCTCTCACGAAAGGTACGACTGCATGGTGTGGTCAGGTACTCGATGCTGTTAAGCCTACACGAGACATTCGTATATACGCATGGGCTGTTGGTCTTGGTGGTTCTATGGTTCCAGTGGAAGCATGGATTCGTTCTGCTAATGGAGCTATAGACGTAGTAGGAAAGGACTCGGTGGGCGAAGGGCAGATTGTTAGCTTCACTGGCAGCTACATATTCAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a972356171adea5b3cbb7f2f59273a2672451cf7064451d5f04c2f9dc77b5dcc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7817
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Salmonella bacteriophage and their application in different food matrices Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2018-09 — GenBank