Protein

View in Explore
Genbank accession
AUR89548.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFEYSGVADTPQDSQLFKAYKASLGNGANLLSNHNFLVQTPDDSQPLPSATPTSYPPGYQIFSGVFANETTGITNLTYIDGRVSFSGGDLYFAVPNAGGIERLTSDQLTASVSDFDGKPRTRGVSFALVGDEYRVTVGIDALEDVSAALTPLGSVKFEEGKNPTKHQTTEGLTAQTVGGVTNYQAASVQGMKDGKTLKGQISIAPSMIDAGDISMSTQGYYGGWNALANREPTGQSKYTLTTLQRVRDSKQDQSWIPDGWVAHYLSIGDGLTYVAIPVINKHLNVCVAGAIPDAIYTSRETCDNLATATDNSDAFTAAFNYSKSIRFPRGSFAHLQRILPKAHDVTMSPDTTLYLKSGGSNIFRISRTENVHIKANGAWAVAPSDYSATSSTVYTEGLRDSSISDLHVKYSGGGFSDCYYLGDGEGINGYNGNRNLRIKGGSAWYATRNCVSWISYEGVCSHSGMDIAYATGDQLGLGIDVEANRYGQTEGKLNITGNYIHDNGNGTNIGGGVAVIFGNNVKIENNNIKNNTVYNVATNAGGTEFNQGVARKQDVRGVSAFSTSDGWVTISNGTDDDETAINAGDRVQFILSNGATLPPEITGSSNRMCVNEVDRAGGRIRVGTDWKYGTITSFSNTGTGNLDLDPWVSDVRLNCSAIGQVSNIDIKDNIISGAAVNDIEIQQFSRDVNTEGNKVTSTGSAGCVRCQYSQDVRLIRNELYVDRDSTADNVNLQFGQVTRPETKYNKLYNSRRRALYSNGCSDGVFTDDQAINSMQTEGFRFERGANATLRGLKVATGSSLSTGLIVFPTVSNSLIEGAMAEGATTSNAASLQLSGTNCRYRNNVQFDGTFRADN
Physico‐chemical
properties
protein length:911 AA
molecular weight: 97673,24350 Da
isoelectric point:5,06142
aromaticity:0,08452
hydropathy:-0,42108

Domains

Domains [InterPro]
DC_0205
STR
1–595
DC_0205 DC_1409
IPR012334
STR
363–646
IPR012334
IPR011050
STR
366–643
IPR011050
AUR89548.1
1 911
Architecture
STR
RBD
STR 1-646 | RBD 647-911
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89548.1
1 911
Domain Start End Length (AA) Confidence
N-terminal 1 352 352 0,8112
Central domain 353 900 549 0,9895
C-terminal 901 911 10 0,3217
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-352
Central
353-900
C-terminal
901-911

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.124.O._10N.286.49.B1
[NCBI] 		1881384 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89548.1 [NCBI]
Genbank nucleotide accession
MG592499.1 [NCBI]
CDS location
range 27780 -> 30515
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGACAACAACCCATCAACAACGAATAACGGCTCTCCGTTAAAAGCCATTGACCGCAACGAGTTACTGGCTCGTGACGAAGCGATCATGAATGATGCCGGCTTTGAGTACAGCGGCGTTGCTGACACACCTCAAGATTCCCAACTATTCAAGGCTTATAAAGCCTCGCTTGGTAATGGCGCAAACCTGCTATCAAACCACAACTTTCTAGTTCAGACGCCTGATGATTCTCAGCCGTTGCCTAGTGCTACGCCGACAAGTTACCCACCTGGTTATCAAATATTCTCTGGTGTATTTGCCAATGAGACCACGGGTATCACCAACCTAACTTACATTGATGGACGTGTTAGTTTTAGTGGTGGTGATTTGTACTTTGCCGTGCCGAATGCTGGTGGTATTGAGCGATTAACTTCAGATCAACTAACTGCATCTGTATCTGATTTCGACGGCAAGCCACGCACCAGGGGTGTTTCATTTGCTTTGGTTGGTGATGAGTATCGCGTGACTGTTGGCATTGACGCGCTTGAAGATGTAAGCGCGGCGCTTACTCCGCTTGGGTCTGTGAAGTTTGAAGAAGGTAAAAATCCGACTAAACACCAAACGACTGAGGGGTTGACGGCGCAGACGGTGGGGGGTGTGACGAATTATCAGGCTGCTAGTGTGCAGGGCATGAAGGATGGAAAGACGTTAAAAGGTCAAATTTCAATTGCCCCATCCATGATTGATGCTGGTGATATTTCAATGTCAACACAGGGCTATTATGGGGGCTGGAACGCTCTAGCAAACCGTGAGCCAACTGGTCAATCTAAATACACGCTAACTACACTACAAAGGGTTAGAGATTCAAAGCAAGATCAGTCATGGATTCCTGATGGGTGGGTAGCCCATTATTTAAGTATTGGTGATGGGCTAACTTATGTTGCAATACCTGTTATAAATAAGCATTTAAACGTATGTGTTGCTGGGGCGATACCTGATGCAATATATACAAGCAGGGAAACTTGCGATAACTTAGCAACTGCAACAGATAACTCAGACGCGTTTACCGCTGCTTTTAATTACTCAAAATCTATTAGATTCCCTAGAGGTAGCTTTGCTCACTTGCAAAGAATTCTCCCTAAAGCCCATGACGTAACAATGAGTCCCGACACTACTTTGTATCTAAAAAGTGGAGGTTCAAATATCTTTAGAATATCAAGAACTGAAAACGTTCATATCAAAGCAAATGGAGCATGGGCCGTAGCCCCTAGTGATTACTCAGCTACCAGCTCAACCGTTTACACAGAAGGCCTTCGCGACTCATCAATTAGTGATTTGCACGTTAAATACTCAGGTGGTGGTTTTTCTGATTGTTACTACTTAGGTGATGGTGAGGGCATTAATGGCTACAACGGAAACAGAAACCTACGCATAAAAGGTGGCTCCGCTTGGTATGCAACGAGAAATTGCGTAAGTTGGATTTCATACGAAGGGGTTTGCTCTCATTCTGGGATGGACATAGCTTACGCGACAGGTGATCAGTTGGGTCTGGGTATTGATGTGGAGGCCAATCGTTATGGTCAGACTGAGGGTAAGCTAAATATCACTGGTAACTACATTCATGACAACGGAAACGGAACAAATATAGGCGGTGGTGTTGCTGTCATTTTCGGTAATAACGTCAAAATTGAAAATAACAACATCAAGAACAACACAGTTTATAATGTAGCGACTAACGCAGGAGGCACAGAGTTCAACCAAGGGGTAGCCAGAAAGCAGGATGTCAGAGGGGTCAGTGCATTTTCCACATCTGACGGCTGGGTAACCATATCAAATGGAACTGACGATGATGAGACGGCAATAAATGCAGGAGACAGAGTTCAGTTTATACTGTCTAACGGGGCAACATTGCCGCCTGAAATAACTGGTTCATCAAACAGAATGTGTGTAAATGAAGTAGACAGGGCGGGCGGCAGGATTCGCGTTGGTACAGATTGGAAGTACGGCACAATCACATCATTCTCAAACACGGGAACTGGAAACCTTGACTTGGACCCATGGGTATCAGATGTCAGACTGAATTGCTCAGCAATCGGGCAAGTTAGTAATATAGATATAAAAGACAATATTATATCTGGTGCGGCAGTAAACGACATTGAGATTCAGCAATTTTCTAGAGATGTAAATACAGAAGGAAACAAGGTCACATCAACTGGTTCTGCTGGCTGCGTTAGATGTCAGTATTCGCAAGATGTTAGATTAATAAGAAATGAGCTTTACGTAGACAGAGACTCAACAGCTGATAACGTAAACTTGCAGTTCGGGCAGGTAACCAGACCAGAGACAAAATACAATAAACTATACAACTCAAGGCGCAGAGCGTTATATTCTAACGGATGCTCAGATGGCGTGTTTACTGACGATCAGGCAATAAACTCAATGCAAACAGAGGGATTCAGATTTGAGAGAGGAGCCAACGCCACACTTAGAGGGCTTAAGGTAGCTACTGGATCATCCCTATCTACTGGGTTGATTGTATTTCCTACTGTTTCTAACAGCCTAATAGAAGGCGCTATGGCGGAGGGCGCGACAACTAGCAATGCTGCATCCTTGCAACTTTCTGGTACGAACTGTAGATATAGAAATAACGTCCAGTTTGACGGCACGTTTAGAGCGGATAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1c3c8ce1c8bb77390d0b277ba281f3295fefefface93b94a318a33cc7c9d013
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6384
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank