Protein
View in Explore- Genbank accession
- CAJ1523444.1 [GenBank]
- Protein name
- Phage tail fiber
- RBP type
-
TFTSPTSPTF
- Protein sequence
-
MATLKQIQFKRSKVAGVNPTAAQLAEGELAINLKDRTLFTKDDLGNIIDLSISAGGNISGNVTIDGTLRVNGPINNFGNFSTSGQITSGGSISAQVFRALQGSFYTRASTGETANAHLWFENADGTERGVMYARPQTTTDGEIRLRVRQGTGSTTNSEFYFRSINGGEFQANRILASDSLVTKRIAVDTVIHGGKAFGVYDTDSLVNYVYPGTGETNGVNYLRRVRAKSGGTMWHELCTAQLGQADEMSWWTGNTPQSKQYGIRNDGRMAGRNSLALGTFTTDFPSSDYGNVGVMGDKYLVLGDTVTGLKYIKQGVYDLVGGGYSVASITPDSFRSTRKALFGRSEDQGTTWIMPGTNAAFLSVQTQADVNNAGDGRTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKLVTGSNNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTIDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRNRETVFEVSDGQGYYFYSQRVAPSGSETTGPVVTQFNGQVNARGSIITDGSLRVNGLSTLSGQVTMDNGLVLSGGGSITGQVKIGNTADAFRIYNAEYGAIFRRSEASLHIIPTLKDAGESGGISNLRPLSVSLNNGMVQMRHSVTLGDDGAGGNMVTVDNDNKLVVITSHSRISPNYRMQLGQSAYIDAECTDTARPAGAGSFASQNNENVRAPFYMNIDRTDTSTYVPIVKQRYVQNNSCYSIGTLINGGNFRVHYHEGGDGVSTGAVIKDLGWEFNKNGDFYSPGKLGAGNVRIGTDGNITGGSGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPEGYAIMEGQTFDADLYPKLAAVYPSGTLPDMRGQTIKGKPSGRAVLSTEADGVKSHSHSASASSTDLGTKTTSSFDYGSKTTSSFDYGTKTSNTTGNHNHTVSGNTSAAGNHQHSQTGPRGPSNQPTGIFP
- Physico‐chemical
properties -
protein length: 970 AA molecular weight: 103113,66090 Da isoelectric point: 8,33726 aromaticity: 0,08454 hydropathy: -0,42206
Domains
Domains [InterPro]
DC_0538
STR
1–969
STR
1–969
IPR048390
ATT
493–628
ATT
493–628
SSF88874
STR
816–959
STR
816–959
IPR037053
ATT
823–876
ATT
823–876
IPR011083
ATT
828–875
ATT
828–875
1
970
Architecture
STR 1-492 | ATT 493-628 | STR 629-822 | ATT 823-876 | STR 877-969 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
970
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 878 | 878 | 0,0608 |
| Central domain | 879 | 959 | 82 | 0,2755 |
| C-terminal | 960 | 970 | 10 | 0,9841 |
Note: Constraints were applied during segmentation.
Fixed 106 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 106 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-878
1-878
Central
879-959
879-959
C-terminal
960-970
960-970
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage vB_Eco_NicPhage [NCBI] |
3070299 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAJ1523444.1
[NCBI]
Genbank nucleotide accession
OY726582.1
[NCBI]
CDS location
range 167354 -> 170263
strand +
strand +
CDS
ATGGCTACATTAAAACAGATACAATTTAAAAGAAGCAAAGTAGCAGGAGTTAATCCTACTGCAGCACAATTAGCCGAAGGCGAATTAGCGATAAACTTAAAAGATCGAACTCTTTTTACTAAAGATGACCTCGGTAATATCATTGACTTAAGCATTTCTGCTGGCGGTAATATCAGTGGAAACGTAACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAATTTTGGAAATTTTTCCACAAGTGGCCAGATTACCTCTGGTGGTAGTATTTCAGCTCAAGTTTTTAGAGCATTGCAAGGTTCGTTTTATACAAGAGCTTCAACCGGTGAAACAGCAAATGCTCATTTATGGTTTGAAAATGCTGATGGCACTGAACGAGGCGTTATGTATGCCCGTCCTCAAACTACAACTGATGGTGAAATACGCCTTAGGGTTAGACAAGGAACAGGAAGCACTACTAATAGTGAATTCTATTTCCGCTCTATAAATGGAGGCGAATTTCAGGCTAACCGTATTTTAGCATCAGATTCGTTAGTAACTAAACGCATTGCAGTTGATACAGTTATTCACGGTGGCAAAGCCTTTGGTGTATATGATACAGATTCATTAGTTAACTATGTATACCCAGGCACCGGTGAAACGAATGGTGTAAACTATCTTCGTAGAGTTCGTGCCAAATCCGGTGGCACTATGTGGCATGAGCTTTGTACTGCTCAATTAGGCCAAGCTGATGAAATGTCTTGGTGGACAGGTAATACTCCACAGTCAAAACAGTATGGTATTCGTAATGATGGTCGAATGGCTGGCCGTAATAGCCTTGCATTAGGTACATTCACTACAGATTTCCCGTCTAGCGATTATGGTAACGTCGGTGTAATGGGCGATAAGTATCTTGTTCTCGGTGACACTGTAACAGGTCTGAAATATATTAAACAAGGAGTTTATGATTTAGTTGGCGGTGGTTATTCTGTTGCTTCTATTACTCCTGACAGTTTCCGTAGTACTCGTAAAGCGTTATTTGGACGTTCAGAAGACCAAGGCACTACATGGATTATGCCTGGTACTAATGCTGCATTTTTATCAGTCCAAACTCAAGCGGATGTGAATAACGCAGGGGACGGTCGGACGCATATTGGCTATAACTCAGGCGGAAAAATGAACCACTATTTCCGTGGTAAAGGCAAAACTAATATTAATACTCAAGAAGGCATGGAAGTTAACCCGGGTATTTTGAAATTGGTAACTGGCTCTAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAATGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAATTGATGGCACTAAGCAAATTTTGTGGGAAGGCGGTACTCGTGCTGGTCAGAATAAAAGCTATGTAACTGTTAAAGCATGGGGTAATTCATTTAACGCATCCGGCGATCGTAATCGTGAAACTGTATTTGAAGTTAGTGACGGGCAAGGATATTATTTTTATTCACAGCGTGTGGCTCCAAGTGGCTCTGAAACTACTGGGCCTGTTGTAACCCAGTTCAATGGACAAGTTAATGCTAGAGGAAGTATTATTACTGACGGAAGTCTTAGAGTTAACGGATTAAGTACATTATCCGGACAAGTTACTATGGATAACGGGCTTGTTTTATCCGGCGGTGGTTCTATTACCGGTCAAGTTAAAATCGGTAATACCGCAGATGCTTTCCGTATTTACAATGCTGAATATGGAGCTATTTTCCGTCGTTCTGAAGCGTCTTTGCATATTATACCTACACTTAAAGATGCAGGTGAAAGTGGTGGTATTTCTAACCTTCGCCCATTGAGTGTTTCTCTTAACAACGGTATGGTTCAAATGCGCCATTCTGTTACGTTAGGTGATGATGGTGCTGGCGGTAATATGGTGACCGTTGATAATGATAATAAACTTGTTGTTATAACTAGTCATAGTCGCATTTCTCCTAATTACCGTATGCAATTAGGACAATCGGCATATATCGACGCTGAATGTACTGATACTGCACGACCTGCTGGAGCCGGTTCTTTTGCTTCACAAAATAATGAAAACGTTCGTGCTCCGTTCTATATGAATATTGATAGAACAGATACAAGCACTTATGTTCCTATTGTGAAACAAAGATACGTTCAAAATAATAGTTGCTATTCTATTGGTACTTTAATTAATGGTGGTAACTTTAGAGTTCATTATCACGAAGGTGGTGACGGCGTTTCTACTGGTGCTGTTATAAAGGATCTTGGATGGGAATTTAATAAAAACGGTGATTTTTATTCTCCTGGTAAATTAGGCGCTGGTAATGTTCGTATTGGTACTGATGGTAATATCACTGGTGGTTCTGGTAATTTTGCTAACTTGAATACAACAATAAATAACCTTAAGACGGATATTGTCTCAAGTTATCCTATTGGTGCTCCGATTCCTTGGCCTACTGATACACCTCCTGAAGGTTATGCCATAATGGAAGGTCAAACATTTGATGCTGACTTGTATCCTAAGTTAGCTGCGGTGTATCCTTCCGGCACTCTGCCTGATATGCGTGGTCAAACTATCAAGGGTAAACCATCTGGGCGTGCTGTATTGAGTACAGAAGCAGACGGTGTTAAGTCACATAGCCATAGTGCAAGTGCATCAAGCACAGATTTGGGTACTAAGACCACTTCTAGTTTTGATTACGGTAGCAAAACGACTTCAAGCTTTGATTATGGTACTAAGACCAGTAATACCACTGGCAACCATAACCATACAGTGAGTGGTAATACTAGTGCCGCTGGTAACCACCAGCACTCACAGACAGGCCCAAGAGGACCTAGTAACCAACCGACCGGGATATTTCCT
Genome Context
Genome Context
Tertiary structure
PDB ID
a867e6fa19dbdfda7a04eb605d56374dcba8f8a0038fd53bc091e164ede94e98
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50