Protein

View in Explore
Genbank accession
AMB17452.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIYDLTVSLDLKQNLNIYTTCKQLDSINLICSIYDNSVQADLTNYNVRLKAMKADSIPLIQEYTGISIPADSNVVTIAADEQLTTTAGEIPIELQFIDKTSGKKKATFNLILEVMSSTLVVDRSISTATYTLLEELENKLDQTSDFFENISEAVEINNELKTSIASGSTLKTGLDMDIVNGNTLKTGLENSTAAANTAKSNLENSISNANTAKSAVDASNTNAQVTKSALEADIAQAQSNSFAAEITNARGTYQTLKARLDANDTSLSDKANQIAQLSNPNLLINGDFQVWQRGTSFNSSGVYYSTDRWRIDAGGGTNSITKQYDDTFKNFIRISTNQYANLWYQMEDADLNKIKGKQITLSFYARKLSGNFVNAVYRVSNVSDAVNNNANNFTTEWKKFTIATTIPIDATALNLGLVNFYTGQNGSTVVYDIAQVKLELGSIATPFIPRLYAQELALCQRYYQAGGVTPQGSAGVNFGGYVVSGIAYHSNIKFKGTMRTTPTVVLTNLYNSNLSNTPTLIESSEEGFIEERIATATGQGRSISIFTADAEIY
Physico‐chemical
properties
protein length:554 AA
molecular weight: 60347,57390 Da
isoelectric point:4,82508
aromaticity:0,08303
hydropathy:-0,22527

Domains

Domains [InterPro]
DC_2224
STR
120–334
DC_2224 DC_0821
Coil
Unmapped
134–154
Coil Coil G3DSA:2.60.120.260
IPR008979
STR
283–439
IPR008979
AMB17452.1
1 554
Architecture
STR
RBD
STR 120-441 | RBD 442-554
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage HM T
[NCBI] 		1779843 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMB17452.1 [NCBI]
Genbank nucleotide accession
KU517658 [NCBI]
CDS location
range 30123 -> 31787
strand +
CDS
ATGGCTATATATGATTTAACAGTAAGCTTAGATCTTAAGCAAAATTTAAATATCTATACGACTTGTAAGCAATTAGATTCTATAAATTTAATATGTAGTATTTATGACAATAGTGTTCAGGCAGATTTAACAAATTATAATGTTAGATTAAAAGCAATGAAAGCTGATTCGATTCCACTAATTCAAGAGTATACAGGTATTTCAATTCCTGCTGACAGTAATGTAGTAACTATAGCAGCTGATGAACAGCTAACAACTACAGCAGGAGAAATACCTATAGAGCTGCAATTTATAGATAAAACTTCAGGCAAAAAGAAAGCAACTTTCAATTTAATATTAGAAGTTATGTCCAGCACATTAGTAGTAGATAGAAGTATTAGCACAGCAACTTATACACTATTGGAAGAACTAGAAAATAAGCTAGACCAAACAAGTGATTTCTTTGAGAATATAAGCGAAGCTGTAGAAATTAATAACGAATTAAAAACTTCAATTGCAAGTGGATCTACATTAAAAACTGGACTTGATATGGATATTGTTAACGGAAATACATTAAAAACAGGATTAGAAAATTCAACTGCAGCAGCTAACACTGCTAAGAGTAACTTGGAGAATTCAATTTCAAATGCTAACACTGCAAAAAGTGCAGTTGATGCAAGTAACACAAATGCACAAGTAACCAAATCAGCTTTAGAAGCAGATATTGCTCAAGCTCAGAGCAATTCATTCGCTGCAGAAATAACAAATGCAAGGGGAACTTATCAAACTTTAAAGGCTAGATTAGACGCTAATGATACATCATTGTCAGATAAGGCGAATCAAATAGCGCAATTAAGCAATCCGAACTTATTAATTAATGGTGATTTTCAAGTTTGGCAAAGGGGTACAAGCTTTAATAGTTCAGGAGTTTATTATTCTACTGATAGATGGAGAATAGATGCAGGTGGTGGTACAAATTCAATTACGAAACAATATGATGATACTTTTAAAAATTTTATTAGAATTTCAACTAACCAATATGCAAATTTATGGTATCAAATGGAAGACGCTGATTTAAATAAAATTAAAGGAAAACAGATTACTCTTTCATTTTATGCAAGAAAACTAAGTGGGAATTTTGTAAACGCAGTTTATAGAGTTTCAAATGTATCTGATGCTGTAAATAATAATGCTAATAATTTTACTACTGAATGGAAGAAGTTCACAATAGCAACAACAATTCCAATAGATGCAACTGCATTAAATTTAGGCTTAGTTAATTTTTATACAGGGCAAAATGGTAGTACAGTAGTTTACGATATAGCACAAGTTAAACTTGAACTAGGTTCTATAGCAACACCTTTTATTCCAAGACTTTATGCGCAAGAACTAGCATTGTGTCAAAGATATTATCAAGCTGGAGGAGTGACACCACAAGGTAGTGCGGGAGTAAATTTTGGAGGATATGTAGTTAGCGGTATAGCTTATCATTCAAATATTAAATTTAAAGGAACTATGAGAACTACCCCAACTGTTGTTTTAACAAATTTATATAATTCTAACTTAAGTAATACACCTACTTTGATTGAATCTTCTGAAGAAGGTTTTATCGAAGAAAGAATAGCAACTGCAACTGGACAAGGTCGAAGTATTTCTATTTTCACAGCAGATGCAGAAATATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
55c34d1ff55b85d5a61f567f625bd5c8e89e9c3632e4ece58b548244bf34c2b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence analysis of the bacteriophage HM T, a temperate phage of the solvent producer Clostridium saccharoperbutylacetonicum N1-4 (HMT) Stegmann,B.A., Poehlein,A., Daniel,R. and Duerre,P. 2020-07-01 — GenBank