Protein

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Genbank accession
YAB58069.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAMEWKQVFLYDGTQILLKPDMFGNYEYPKEKWTDIKPPQGIYTPFRFDGEKWIGSTKEEWEARQPKIEIPPSEEEELHLELIKTNIELKKEVSQLNEDVANLVTMLVQKQGGN
Physico‐chemical
properties
protein length:114 AA
molecular weight: 13415,14510 Da
isoelectric point:4,76717
aromaticity:0,10526
hydropathy:-0,75702

Domains

Domains [InterPro]
DC_0222
STR
1–114
DC_0222
Coil
Unmapped
79–106
Coil
YAB58069.1
1 114
Architecture
STR
STR 1-114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Undine
[NCBI] 		3446833 Viruses >
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAB58069.1 [NCBI]
Genbank nucleotide accession
PV956271.1 [NCBI]
CDS location
range 23585 -> 23929
strand +
CDS
ATGGCAATGGAATGGAAACAAGTGTTTTTATATGACGGAACACAAATACTTTTAAAACCTGATATGTTTGGCAATTATGAATATCCGAAAGAAAAATGGACGGATATTAAACCACCGCAAGGAATTTATACACCGTTTCGTTTTGATGGGGAAAAGTGGATTGGTAGCACTAAAGAAGAATGGGAAGCAAGACAACCTAAAATAGAAATACCACCAAGCGAAGAGGAAGAACTTCATCTTGAACTTATAAAAACAAACATAGAACTAAAAAAAGAAGTTTCGCAACTCAATGAAGATGTAGCAAATCTTGTAACAATGTTAGTTCAAAAGCAAGGAGGCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c75050267b0177902631c864f7787ebdb63d415ac406ab863280fd7e6ff0519a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8366
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequences of Staphylococcus epidermidis siphophages Cicami, Sazerac, Slasher, Southeast, Spartan, and Undine Gonzalez,K., Qavi,Y., Hill,C., Aslan,B. and Hatoum-Aslan,A. 2022-06-20 — GenBank