Protein

View in Explore
Genbank accession
UCR81182.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MATLKQIQFKRSKVAGVRPAPAQLAEGELAINLKDRLLFTKDDTGAIIDLGFAKGGNIDGNVIHTGNYNQTGDYTLNGVFTQIGDFNLNGIARVTRDIIAAGQIMTHGGELISKSASTSHLRFFDGDDRERGIIFSPNNAGATNQVVNIRVQDYSTASESTYAFSGSGLFTSPEVSAWKSISSPQILTDKVITNGKKTGDYDIYSLANNTPMTESETAINRLRVMRNAVGARIFHEVKDSDGITWYAGDGLEAYLWSFTWSGGLKAGHSISVGTPGDSKGYSELGTASIALGDNDTGLKWHQDGYYFSVNNGTRTFLYGPAETTSLRKMVMGYSVNGTDLTTPPSENYALATVVTYHDNNAYGDGQTLLGYYQGGNYHHYFRGKGTTNVNTAGGLLVTPGNIDVVGGSVNIDGRNNASTLMFRGNTTGSSSVDNMTISVWGNTFTNVAGDRKNVMEISDATSWMWYIQRKTDDKVEAHLNGGMNVNESINVGKEVNASGTIAGNAVNALRIWNDDYGAIFRRSETSLHIIPTAFGEGKTGDIGPLRPLSIDLSNGKVVIPDLDLSYASFAANGYIKFGGHGAGAGGYDIQYAQAAPVFQEIDDDAVSKYYPIVKQKFLQGKAVWSLGTEINSGTFVLHHYKEDGTQGHTSRFNADGTVNFPDNVQVGGGEATIAKNGNIWSDIWKTFTSAGDVTNLLGAVYSRVSKEGDTMTGRLTLNANSDAIVINSAATESGYVKGQKAGVNNWYVGNGGADNNLSFYSFQTNSGVNIHNSGEVGLAPQGSDTFYFNRDRLYIKAAQWVAHQSGAWGDQWGLEAPVFVDFGNVGNDSYYPIIKGKSGITNEGYISGVDFGMRRTPQTWGQAIIRVGNQENGNGPVGIFEFHSSGLFYAPSLVQTPAIGVGTVNGLGSPSIAIGDNDTGLSHGGDGRINMVANSVHIASWGTMYQSHPGLWDSNGSFWTEVGRAIISHGHLVQANDSYSTFVRDVYVRSDIRVKKDLVKFENASQTLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALIKSLLK
Physico‐chemical
properties
protein length:1100 AA
molecular weight: 118372,66890 Da
isoelectric point:5,41587
aromaticity:0,09636
hydropathy:-0,32327

Domains

Domains [InterPro]
DC_0538
STR
1–685
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
445–550
IPR048390 DC_0339 Coil
IPR030392
CHP
990–1049
IPR030392
DC_0247
RBD
992–1100
DC_0247
UCR81182.1
1 1100
Architecture
STR
ATT
STR
RBD
STR 1-444 | ATT 445-550 | STR 551-1023 | RBD 1024-1100
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR81182.1
1 1100
Domain Start End Length (AA) Confidence
N-terminal 1 222 222 0,2127
Central domain 223 421 200 0,3520
C-terminal 422 1100 678 0,7813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-222
Central
223-421
C-terminal
422-1100

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSD2002
[NCBI] 		2880953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR81182.1 [NCBI]
Genbank nucleotide accession
OK335775 [NCBI]
CDS location
range 33113 -> 36415
strand -
CDS
ATGGCTACTTTAAAGCAAATCCAATTTAAAAGAAGTAAAGTAGCTGGTGTACGTCCGGCACCAGCCCAGTTGGCTGAAGGCGAACTGGCTATTAACTTAAAGGACCGTTTACTTTTTACTAAAGACGACACCGGTGCCATCATTGACCTTGGCTTTGCTAAAGGTGGTAATATTGACGGCAATGTTATTCATACCGGTAACTACAATCAAACCGGTGATTATACACTTAATGGTGTATTTACTCAAATTGGTGATTTCAATCTCAATGGTATTGCTCGAGTAACTCGCGATATTATTGCCGCCGGGCAGATTATGACCCACGGTGGTGAACTTATTTCTAAGAGTGCCTCAACTTCTCATCTTCGTTTCTTTGATGGCGATGACCGTGAGCGTGGTATTATTTTTTCTCCTAATAATGCAGGAGCAACTAACCAAGTAGTTAATATTCGCGTACAGGATTATTCTACTGCAAGCGAAAGCACTTATGCATTTTCAGGCAGTGGCCTATTTACTTCACCTGAAGTATCAGCATGGAAATCTATTTCGTCTCCTCAGATTTTGACCGATAAAGTTATTACAAATGGGAAGAAGACGGGCGATTATGATATCTATTCATTAGCAAATAACACTCCAATGACAGAAAGCGAAACGGCTATTAACCGCCTCCGTGTTATGCGAAATGCTGTAGGAGCACGTATATTCCATGAAGTTAAAGATAGTGATGGAATAACCTGGTATGCTGGAGATGGCTTAGAAGCTTATCTTTGGTCGTTTACCTGGTCTGGCGGATTGAAAGCTGGTCATTCTATTTCTGTAGGCACCCCAGGCGACTCTAAAGGATATTCTGAATTAGGAACGGCTTCAATTGCTCTTGGCGATAATGACACCGGGTTAAAATGGCATCAGGATGGATATTATTTCAGCGTTAATAACGGCACGAGAACTTTCCTGTACGGCCCTGCAGAAACCACCAGTCTTAGAAAAATGGTTATGGGTTATTCTGTAAACGGTACCGATTTAACCACTCCTCCGTCGGAAAACTATGCTTTGGCGACGGTTGTCACTTATCATGATAATAACGCGTATGGTGACGGTCAAACTCTTTTAGGTTATTATCAAGGTGGCAATTATCACCACTATTTCCGTGGTAAGGGTACTACAAACGTTAACACCGCTGGTGGTTTGTTAGTTACTCCTGGTAATATTGATGTTGTTGGTGGTTCGGTTAATATTGATGGCCGCAACAACGCTTCGACTCTTATGTTCAGAGGAAATACAACAGGAAGTAGTTCAGTTGATAATATGACTATCAGCGTTTGGGGTAATACCTTTACTAATGTCGCTGGTGACCGCAAAAACGTAATGGAAATATCTGATGCCACTAGTTGGATGTGGTATATTCAGCGCAAAACCGATGACAAAGTTGAAGCCCATTTAAATGGTGGCATGAATGTAAACGAAAGCATAAATGTCGGTAAAGAAGTTAACGCCTCCGGCACTATTGCTGGTAATGCTGTCAATGCTCTTAGAATTTGGAATGATGACTACGGCGCCATTTTCCGCCGTTCAGAAACAAGCCTACATATTATTCCTACCGCCTTTGGTGAAGGTAAAACCGGCGATATAGGGCCACTTCGTCCTTTAAGTATAGATTTAAGTAATGGTAAGGTAGTTATTCCTGACTTAGATTTGAGTTATGCTTCTTTTGCAGCAAACGGTTATATTAAATTCGGTGGACACGGCGCCGGTGCGGGTGGTTATGATATTCAATATGCACAAGCAGCTCCTGTTTTCCAAGAAATTGATGATGACGCGGTAAGTAAATATTATCCTATTGTTAAGCAGAAATTCTTACAAGGAAAAGCTGTTTGGTCTTTAGGTACTGAAATTAATTCCGGGACTTTTGTTTTGCATCATTACAAAGAAGACGGGACCCAAGGTCATACATCAAGATTTAATGCTGATGGTACAGTTAATTTCCCGGATAACGTGCAGGTTGGCGGTGGTGAAGCTACTATTGCCAAAAATGGTAACATCTGGTCTGATATCTGGAAAACGTTTACTTCTGCCGGTGATGTAACCAATCTTCTTGGTGCTGTCTATAGCCGTGTTTCTAAAGAAGGCGACACAATGACAGGCCGCTTAACTCTTAATGCAAACTCGGATGCTATTGTTATTAACAGTGCTGCAACCGAATCTGGTTATGTGAAAGGACAAAAAGCAGGCGTTAATAACTGGTATGTTGGTAATGGCGGCGCTGATAACAACTTATCGTTTTATAGTTTCCAAACTAATTCAGGCGTTAATATTCATAATAGTGGAGAAGTTGGTTTAGCTCCTCAGGGGTCGGATACTTTTTATTTTAATAGGGACCGACTTTATATAAAGGCTGCACAATGGGTGGCTCATCAATCTGGTGCATGGGGTGACCAATGGGGTTTAGAAGCTCCTGTATTTGTGGATTTTGGCAACGTCGGTAATGATAGTTATTATCCGATTATCAAAGGAAAATCTGGTATTACTAACGAAGGATACATATCAGGTGTTGATTTCGGTATGCGTCGTACTCCACAAACATGGGGACAAGCTATAATTCGTGTTGGTAACCAGGAAAATGGCAACGGTCCTGTAGGTATTTTCGAATTCCACTCTAGTGGTTTATTTTACGCCCCGTCTTTAGTCCAGACTCCTGCAATTGGTGTTGGTACTGTTAATGGATTAGGCTCTCCTAGTATTGCTATTGGTGATAACGACACAGGATTATCACACGGCGGTGACGGCCGAATCAATATGGTTGCTAATAGTGTACATATTGCAAGCTGGGGTACAATGTATCAATCTCATCCGGGCCTTTGGGATTCAAATGGATCTTTTTGGACAGAAGTTGGCAGAGCAATTATTTCTCACGGCCATTTAGTTCAGGCAAACGATAGCTATTCGACATTTGTTCGTGATGTTTATGTTCGTTCTGATATTCGTGTTAAAAAAGACCTTGTTAAATTTGAAAATGCTTCACAAACACTTTCAAAAATTAACGGTTACACTTATATGCAGAAACGTGGCCTGGATGAAGAAGGTAATCAGAAATGGGAACCTAATGCTGGTTTAATTGCTCAAGAAGTTCAAGCTATTTTACCTGAATTGGTTGAAGGCGACCCTGACGGTGAAGCTTTACTTCGTTTAAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCACACTGCAGAAATAGCAGAATTGAAATCAGAGATTGAAGAACTTAAAGCACTAATTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8aeacc725dcee4de7fe6f3adf93c1a32a6a81892906d876b80313e1235e69ecd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages are superior to antibiotics on the recovery when treating E. coli O157:H7 infections Wang,Y., Subedi,D. and Tang,F. 2024-01 — GenBank