Protein

View in Explore
Genbank accession
UJH95997.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAVNIAAIKYIPDLPAVSALAGADLLHVSQGNTDKQATLTQFARFINDAAHPIGQLMFFGVKGKDPNTLFPGQSWTRYNAGRSLRVCLDNESNLGQNVGADQISLNTSQMPAHSHGAQGLVIQDNGSHQHNATTSWVGDHAHSAWTDAQGNHNHVVGLRSPNNHDGAGSVFGTSGGGGYNGAAAYGKGGNGIDLYPLTNVAGNHGHNVGIGGAGGHNHTLTTEWSGQHSHGIIGQVLSNGSGAAITIVPNTVHVACWIRNS
Physico‐chemical
properties
protein length:261 AA
molecular weight: 27020,34090 Da
isoelectric point:6,63387
aromaticity:0,06130
hydropathy:-0,29349

Domains

Domains [InterPro]
DC_0348
RBD
2–180
DC_0348
IPR053827
ATT
48–154
IPR053827
UJH95997.1
1 261
Architecture
RBD
ATT
RBD
RBD 2-47 | ATT 48-154 | RBD 155-180 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJH95997.1
1 261
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9947
Central domain 50 248 200 0,0012
C-terminal 249 261 12 0,9981
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-248
C-terminal
249-261

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nafs113
[NCBI] 		2894291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95997.1 [NCBI]
Genbank nucleotide accession
OK570186 [NCBI]
CDS location
range 54993 -> 55778
strand +
CDS
ATGGCTGTGAATATTGCCGCAATTAAGTATATCCCCGACCTGCCCGCCGTTTCCGCGCTGGCTGGTGCCGACCTGCTGCACGTCTCGCAGGGCAACACCGATAAACAGGCTACGCTGACTCAGTTTGCCCGCTTCATCAATGACGCCGCGCACCCTATCGGCCAGCTGATGTTCTTCGGCGTTAAAGGCAAAGACCCTAATACGCTTTTCCCCGGCCAGTCATGGACCCGTTACAACGCCGGGCGAAGCCTTCGTGTGTGTCTGGATAATGAATCGAACCTGGGTCAGAACGTCGGCGCAGACCAGATCTCACTGAACACGTCGCAGATGCCAGCCCATAGCCACGGCGCGCAGGGTCTGGTGATTCAGGATAATGGCAGCCACCAACACAACGCCACTACGTCATGGGTCGGCGACCACGCTCATTCAGCATGGACCGATGCGCAGGGCAACCATAACCACGTTGTCGGCCTTCGCAGCCCAAACAACCATGATGGTGCTGGCAGTGTATTTGGAACCAGCGGCGGCGGCGGCTATAACGGTGCTGCGGCATATGGTAAAGGCGGTAACGGCATTGACCTGTACCCGCTAACGAACGTGGCGGGAAACCACGGCCACAACGTCGGCATCGGCGGCGCTGGTGGTCATAATCACACCCTGACGACGGAATGGTCGGGACAACACTCACACGGAATCATTGGTCAGGTGCTGTCCAATGGTAGTGGTGCGGCAATCACCATCGTTCCAAATACCGTTCATGTAGCGTGCTGGATAAGGAATTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b202706d0a4f443da313fecd33a99c7e3f33f0b1100c35c767ff285234361b57
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7327
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nafs113 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank