Protein

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Genbank accession
AVH85685.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,61
Protein sequence
MRKLKSQLDEHIGSNGNAHLAATKDTAGFMSKDDKYLLDSRGNVATGLDPAVQYDVLKLDFGLYVGRSFLNAPSSVDNSICLVKVEGWSTYKFITFYWLSAGLTFTRSIYSTIDSGWQDGRNWTAMTLASGFTGNIQARKIPLGNSSMVEVRVDVHCNISNSSLNVMTTLPTTYRFVSGLNVTAIFTGAVGTSNATAGIILHSAGDLNVYRDQAMAGSLTDVAGTLTYMV
Physico‐chemical
properties
protein length:230 AA
molecular weight: 24822,79100 Da
isoelectric point:6,89294
aromaticity:0,09565
hydropathy:0,02000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Silenus
[NCBI] 		2079434 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85685.1 [NCBI]
Genbank nucleotide accession
MG765278 [NCBI]
CDS location
range 17434 -> 18126
strand +
CDS
ATGAGAAAACTAAAATCACAACTTGATGAACACATTGGTAGCAATGGCAATGCACATTTAGCCGCAACAAAAGACACAGCTGGTTTTATGTCTAAAGATGATAAATATTTGCTGGATTCCAGAGGCAACGTTGCTACTGGATTAGATCCAGCCGTTCAGTATGATGTTTTAAAATTAGATTTTGGATTATACGTTGGTAGAAGTTTTTTAAACGCTCCAAGTTCGGTTGATAATTCTATCTGTTTAGTTAAGGTTGAAGGCTGGTCAACTTACAAGTTTATTACATTTTATTGGCTATCTGCCGGGTTAACATTCACTCGTAGCATTTATTCAACAATTGATAGCGGCTGGCAAGATGGCAGAAATTGGACTGCAATGACGTTAGCAAGTGGGTTCACTGGCAATATTCAAGCTAGAAAAATACCACTTGGCAACTCATCAATGGTAGAAGTAAGAGTTGATGTACATTGCAACATTAGTAATTCTAGCCTTAACGTTATGACTACTTTGCCAACAACCTATCGATTCGTAAGTGGTTTAAACGTTACAGCCATTTTCACCGGTGCCGTTGGCACAAGCAATGCGACGGCTGGTATCATTCTACATTCAGCCGGTGACTTAAATGTGTATCGAGACCAAGCAATGGCAGGAAGTTTAACTGACGTTGCAGGAACACTAACTTATATGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6d3dc549a231d103295c54586a7ebe04a18c9583c958f56b9cc3dd471c56e32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I. and Hestbjerg Hansen,L. 2018-12-03 — GenBank