Protein

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Genbank accession
YP_007676443.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATTETILLGDGTTTQFGFTFPYIKTEDVKVELQEFDTVESTVISRVQISSFSIPSNNPTVVDFSAIGAATNYQAITGAPLTNHAVNTSNIIRVRIYRFTSADANPSTFLQGSTIRAQDLNDNFEQILYIMQERQNTIQIIQLGGIGENIIGTVSIQDDAITADKLSDSTVTDSDRAVTTNHIRNDAVTADKLADTTVTPGTYTATDITVDAQGRITAASSGTIATSEIESNAITTGKLDTGAVTTAKLADDAVTADKLADTTVSAGSYTRADITVDAQGRITSATSNNSSIQTADIADDAVTAAKLADTTVAAGSYTNADITVDAQGRLTAASNGVTPGHAYLYEKVSAGTDGGSGTASGTTAPGVWNQRNLNTEVFDTGNFVSLSSNQFTLIAGTYLIKWSAPAFDVSHHQSRLYNITDAAVVDYGTMEDAGLDDEQTRSFGVARVTITGPKTYKIEHAFRYVSSSNSNKSLGSAGGMDWSVPIYTTVEIYKEV
Physico‐chemical
properties
protein length:496 AA
molecular weight: 52388,82120 Da
isoelectric point:4,44409
aromaticity:0,06855
hydropathy:-0,17258

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIP1
[NCBI] 		754041 Uroviricota > Caudoviricetes > Autographivirales > Kajamvirus SRIP1 >
Host Synechococcus sp. WH 8101
[NCBI] 		59932 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007676443.1 [NCBI]
Genbank nucleotide accession
NC_020867 [NCBI]
CDS location
range 12349 -> 13839
strand +
CDS
ATGGCAACAACTGAAACAATTTTACTTGGAGATGGAACAACTACTCAATTTGGTTTTACATTTCCTTATATTAAAACAGAAGATGTTAAAGTAGAACTACAAGAATTTGATACAGTCGAGTCCACTGTTATTAGTAGGGTACAGATCAGTTCATTTTCTATCCCTTCTAACAATCCAACTGTTGTCGATTTTAGCGCCATTGGTGCAGCTACTAATTATCAAGCAATTACTGGTGCTCCGCTAACTAATCATGCTGTAAATACATCTAATATTATTAGAGTACGTATTTACCGTTTTACAAGTGCTGACGCTAACCCATCTACTTTTTTACAAGGTTCAACAATACGTGCACAAGACTTGAACGATAATTTTGAACAAATCTTGTACATCATGCAAGAGCGTCAAAATACAATTCAAATAATCCAACTTGGTGGTATTGGTGAAAACATTATTGGTACAGTTTCTATCCAAGATGATGCAATTACTGCTGATAAATTAAGTGATAGTACTGTTACCGATAGTGATCGTGCTGTAACTACTAATCATATTCGTAACGATGCAGTTACAGCTGATAAGTTAGCAGATACTACGGTAACACCTGGTACTTATACAGCAACAGATATTACAGTTGATGCTCAAGGTCGTATTACTGCAGCATCCAGTGGAACAATTGCTACAAGTGAGATTGAGTCTAATGCAATTACAACTGGTAAATTAGATACTGGTGCTGTTACTACTGCTAAACTAGCAGATGATGCAGTTACAGCTGATAAACTAGCGGATACCACTGTTTCTGCTGGATCGTACACTAGAGCAGACATTACAGTTGATGCACAAGGGCGTATTACTTCAGCAACTAGTAATAACTCTTCAATTCAAACTGCAGACATTGCAGATGATGCAGTTACTGCTGCTAAACTAGCAGATACCACTGTTGCTGCTGGTTCTTATACTAATGCAGATATTACTGTAGATGCTCAAGGTAGGTTGACTGCTGCTAGTAATGGTGTTACTCCTGGACACGCATACCTTTATGAAAAGGTAAGTGCTGGTACTGATGGAGGATCTGGCACTGCTTCAGGTACGACAGCTCCTGGTGTATGGAACCAACGTAATTTAAACACTGAAGTATTTGACACCGGTAATTTTGTGTCTTTGTCAAGCAATCAATTTACACTTATTGCTGGAACATACCTCATCAAATGGTCTGCACCTGCTTTTGATGTAAGTCATCATCAATCTAGACTTTATAATATTACCGATGCAGCAGTTGTTGATTACGGTACAATGGAAGATGCTGGTCTTGATGATGAACAAACACGTTCTTTTGGTGTTGCTCGTGTGACTATTACAGGTCCCAAAACATATAAAATTGAACATGCTTTTAGGTACGTTTCTTCTAGCAACAGTAATAAAAGTTTAGGTTCTGCTGGCGGTATGGACTGGTCAGTACCTATTTACACCACCGTTGAAATCTACAAAGAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf2219996c0dc997aad257ae8934ae17f54913860122510f4c2494865a1f5dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7687
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-RIP1 isolate R2_2007 Henn,M.R., Marston,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2021-02-24 — GenBank