Protein

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UniProt accession
A0A0D3MV26 [UniProt]
Protein name
Carbohydrate binding domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFNYTPLTETQKLKDMYPKVNDIGNFLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYYKIYYSPYSSNKMYIKTYANGTIYDWISFKLDEGNLYNEGNTLNVKELTESTTQYATLVNPPKENLSTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPETSSSNIKTDNWNTPPFWGYTANSGRSGVRFRGENTIQIDDGSSTYPTAMTNRFKMGNELSVGDTITVSVYAKINDPALLKDNLVYFELAGYDTVDRTDNPYTGGRREITASEITTEWKKYSFTFTIPENTTGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHENDVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGYHTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQGWKLLKQSETSTLLWEGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNTSNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRASVQPGMVKSITLDGSTNTTKVASWNEKERIKVYNIMGINRG
Physico‐chemical
properties
protein length:639 AA
molecular weight: 72400,93660 Da
isoelectric point:6,25118
aromaticity:0,12676
hydropathy:-0,59984

Domains

Domains [InterPro]
DC_0568
STR
5–408
DC_0568
cd19958
STR
44–111
cd19958 G3DSA:2.60.120.260 DC_0448
IPR003305
CBM
222–337
IPR003305
A0A0D3MV26
1 639
Architecture
STR
STR 5-638 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0D3MV26
1 639
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,5409
Central domain 294 504 212 0,1849
C-terminal 505 639 134 0,9629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-504
C-terminal
505-639

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiIPLA-RODI
[NCBI] 		1572703 Uroviricota > Caudoviricetes > Herelleviridae > Kayvirus > Kayvirus rodi
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016798 hydrolase activity, acting on glycosyl bonds Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
d94a70539bdf0daeb8aba264035894be68b353efe5cb1af0fddd14a700f11d87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50