Protein

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Genbank accession
ACB72561.1 [GenBank]
Protein name
putative tail component
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVSEYGQYRILNEDLMAIGVLKIGGKTEFYGDTITHQVADADQSSSSYGESPQAPANESNPNLNAESKNFDHSGSISVLEKPGSDSDKIKVGNCLAYYDEPQERWYVMKIWNVERTLNASGAHVRTAQLVNLGLWDLHYRMTQKKSMKSASAKTAFYWLLQDMDWNADFSAIQNYSVTGDVEFNANTKSSAMLQTLLQQYNLECDFYVEYKDNYVAKKFFQVAPEIDSDYYGEAYVGKNVTALSQQTNGDVITRLTVMGPNGETMAKAGDYTSGPIKHDKGFSYVYDADANAEYSDGVHWLDGVITTDNIKDAAGLMLYGAKLLKMYNHPRISYTLQCTHTFNPKLGATVRTKDFLADPEITTYQRVISKTFSFANPSQNTVSFGEFVTVRRVTPAWLANYSTNIQKALKAATEDASNISVSVLTPDGTDFKGNDQTKRFYIQAWSMGTNISGYIQKQGFEFLKYKADTFSLGGVVDDSAVGEYEKTLYGYSHTLTSNDLGNYRAQVDNDYLTSDAEIYPDQTACVSIAHLPHEAFGHRVALQNAWRLSDGSLVTTYSLENVRDGLNEYDNDCALIHYSTNGTVLGSARIASGGHGSCFGVQEVNSNYCYVYMNTYNNDDSRNKYRFTQIKFMLKQTNVKVSDNKTSRDDFKIGYTSPDYFYTSLDNDSGYCVVVFSKDWHAYTVKLTDLMAGNFKPTQTAVLTDYGWNPQTQTWQSPAIKYPYVFWHSGDYDMHDRRVLYGINMEHKGQVFELEYNFLDYIHTPIDFNVVEPEALSYRNGKLLVSFNCANTSGNGVERIEPVFEIPLKGR
Physico‐chemical
properties
protein length:812 AA
molecular weight: 91364,40920 Da
isoelectric point:5,22893
aromaticity:0,12685
hydropathy:-0,48288

Domains

Domains [InterPro]
DC_0109
STR
23–797
DC_0109
IPR007119
Unmapped
66–386
IPR007119 IPR048799
ACB72561.1
1 812
Architecture
STR
STR 23-803 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACB72561.1
1 812
Domain Start End Length (AA) Confidence
N-terminal 1 617 617 0,8714
Central domain 618 801 185 0,7228
C-terminal 802 812 10 0,1446
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-617
Central
618-801
C-terminal
802-812

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage JCL1032
[NCBI] 		37105 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus delbrueckii subsp. lactis
[NCBI] 		29397 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACB72561.1 [NCBI]
Genbank nucleotide accession
EU409559 [NCBI]
CDS location
range 18724 -> 21162
strand +
CDS
ATGGCAGTAAGCGAATATGGACAATACCGGATTTTGAATGAGGACTTGATGGCGATTGGCGTTTTGAAGATTGGCGGCAAGACTGAATTTTACGGCGATACGATTACGCACCAGGTTGCGGACGCAGACCAATCCTCATCATCATATGGTGAATCACCTCAAGCCCCAGCAAATGAAAGCAATCCCAATCTTAATGCTGAATCAAAGAACTTTGACCACTCTGGCAGCATTTCAGTTCTTGAAAAGCCCGGATCTGATTCAGACAAGATCAAGGTTGGCAATTGCTTAGCATACTACGACGAACCTCAAGAACGTTGGTATGTGATGAAGATTTGGAATGTGGAAAGAACTTTGAATGCCAGTGGCGCTCACGTGCGCACGGCCCAGCTGGTCAACCTGGGCTTGTGGGACTTGCACTACAGAATGACACAGAAGAAGTCGATGAAGAGCGCATCGGCAAAGACCGCTTTCTATTGGCTCTTGCAGGATATGGACTGGAATGCAGACTTTAGTGCAATCCAGAACTATTCAGTAACTGGTGATGTTGAGTTCAATGCAAATACTAAGAGTTCCGCAATGCTTCAAACGCTCTTGCAACAATACAATCTTGAATGTGACTTTTACGTAGAGTACAAGGACAACTATGTAGCCAAAAAGTTTTTTCAAGTAGCCCCAGAAATTGATTCTGACTATTACGGCGAAGCATATGTAGGCAAGAACGTAACAGCCCTCAGTCAACAAACAAACGGTGACGTTATTACACGACTTACTGTCATGGGACCTAACGGTGAAACAATGGCGAAAGCTGGTGATTACACCTCTGGCCCTATTAAACATGATAAGGGCTTTTCCTATGTTTACGATGCTGATGCAAACGCTGAATACAGTGACGGCGTGCATTGGCTGGACGGGGTGATTACGACAGACAATATCAAAGACGCTGCTGGGCTGATGCTGTACGGCGCTAAGCTTTTGAAGATGTACAATCACCCAAGAATCAGCTACACCTTGCAATGCACTCACACCTTCAATCCTAAACTGGGCGCTACTGTAAGAACTAAAGACTTTTTAGCTGACCCAGAAATCACTACCTACCAAAGAGTTATCAGCAAGACATTTTCATTTGCTAATCCAAGTCAGAATACTGTCTCATTTGGCGAATTTGTGACCGTTAGACGGGTTACGCCGGCATGGTTGGCTAACTATAGCACCAATATTCAGAAGGCTCTTAAAGCGGCTACAGAGGACGCCTCAAACATTTCGGTTTCCGTGCTCACTCCAGATGGCACTGACTTTAAGGGGAATGACCAAACCAAGCGATTCTATATTCAAGCTTGGTCAATGGGGACTAACATCAGCGGCTATATTCAAAAACAAGGCTTTGAATTTTTGAAATACAAGGCAGATACATTCAGCTTGGGCGGCGTGGTTGATGACAGTGCAGTTGGCGAATACGAAAAGACATTGTACGGCTATTCTCATACATTGACCAGCAACGACCTGGGCAACTATAGAGCACAAGTCGATAATGATTACCTCACCAGCGATGCTGAAATCTATCCAGACCAAACTGCTTGCGTAAGCATTGCTCATTTGCCGCATGAAGCTTTCGGCCACCGGGTTGCTTTGCAGAATGCTTGGCGGCTGAGTGATGGTTCACTTGTAACTACGTACTCTCTTGAAAATGTGCGGGACGGATTGAACGAGTATGATAACGACTGTGCATTGATTCACTATTCTACAAACGGCACTGTCTTAGGCTCAGCTAGAATTGCGAGCGGCGGTCACGGTTCTTGCTTTGGTGTGCAGGAAGTAAACAGCAACTACTGTTATGTTTACATGAACACGTACAATAATGATGATTCCAGAAATAAGTATAGATTTACACAGATTAAGTTTATGCTGAAGCAAACCAATGTTAAGGTTTCAGACAACAAGACCAGCCGTGACGATTTCAAGATCGGTTATACTAGCCCGGACTATTTTTACACAAGCTTAGACAATGACAGCGGCTATTGTGTAGTGGTGTTTTCTAAAGATTGGCATGCGTACACTGTTAAGCTGACTGACTTAATGGCAGGCAACTTTAAGCCAACTCAAACCGCAGTGCTTACTGATTACGGTTGGAACCCACAAACTCAGACTTGGCAGTCTCCAGCGATTAAATATCCATATGTATTTTGGCACAGTGGCGATTATGACATGCACGATAGGCGTGTACTCTACGGCATCAACATGGAGCACAAGGGGCAAGTCTTTGAACTTGAATACAACTTCCTGGACTATATCCACACTCCTATTGACTTCAACGTAGTTGAACCCGAAGCATTGTCATACAGAAATGGCAAGCTGCTAGTGTCGTTCAATTGTGCAAACACTAGCGGCAATGGCGTTGAGAGAATCGAACCTGTTTTTGAAATTCCATTGAAGGGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
121f443f0f537327b1e520ba2de0798545a00656d3788fab0c5e4100a54de9f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7652
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A conserved C-terminal region in Gp71 of the small isometric-head phage LL-H and ORF474 of the prolate-head phage JCL1032 is implicated in specificity of adsorption of phage to its host, Lactobacillus delbrueckii Ravin,V., Raisanen,L. and Alatossava,T. 2002 11948159 GenBank
Two self-splicing group I introns interrupt two late transcribed genes of prolate-headed Lactobacillus delbrueckii phage JCL1032 Riipinen,K.A. and Alatossava,T. 2004 15669111 GenBank
Integration of the group c phage JCL1032 of Lactobacillus delbrueckii subsp. lactis and complex phage resistance of the host Riipinen,K.A., Raisanen,L. and Alatossava,T. 2007 18045432 GenBank