Protein

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Genbank accession
YP_008125991.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MFDVKDGIQISKSVVINKDKDVFAKKVTASGGAVINTGSWNKDGLRLNGAAPSIYFSQDDGSNAYLGLNGGNFYVLPDTDSNGTYSSPYILQASFSGNDFRYFGHKVYHAGNKPYFSEIIGTIDNGQLPNDITVGGNLAGYNVYAGKVGLTTNDGHGNANVTFNHRNGRPVQNGNSLRIETNVDGTSNPVFVFEAAANVTAGEAIVLSNIATLGLSEFTYKGNAVYHAGRKPTYGELGTIYHGNVDFANQYLNTGSSPTFLNGTFTGELKVENAQPWLRLNDTTGNNARIRNQSNVIYIDADNGTGNGILQIGSLRTDGILLGDTSGPYLYRSDVAKNHFSLRVGNSGAYKYLTFKGDDGTLELGGQRVLTVGSGKAVDSDKLDGVNSSQFLRSDVSNTLSANLHVTGSISFPVGDSFVGVDQEENYLRYRFGSTATAKGVRIDDYDTPVIELNRDIASDFKRGLKVSGNAVYHRGDKQDYIPTLGNQALMPTGRNALAEGIHTYGTKNNTTNTPHASKYGESIVWGSGAAGSVEVWGGWVGAGWGRLYTRALRNVTDDWSDWYEIYTSRDGVPFDKITGRTLAHMNAREGYWGLNSSTDGSNGSWIRTPSAGLLPYQSGVSSSLGASSWKFDNLHVKNGYMDNATVTGSVNAGSGNFGSLKAKNDNTNTLIIDKSSSSVYSGLQYATGGKASWLWYTSNNGTEDFSLQTRNFNTDGQYRDTVFSIDHSNAQMRFMRTGRFDESLRVDGWVLSDRVRNISGTGMYIYGGDMSSQHDAIQSKYGEGELIYLAAEGGVQILSSGDNLNNNGQAADTLTNDRRVVLCDSGGNSRFYQGTVTVDQIHAGNGQIAPSAAKLQVKGIQRTGTLYLHEGDNPGPNTEVILSSQAGGTRLRVATKDGYIDVGPQNSSYAHLTTNLDRFYFNKEIQVNGDIKVYNKLSKFTADGKNLIVGADSNYFSRFTDAGKISRKNSGWDNNSAEVDIFKSAWMSHLGDHILIRPTGNQVNNGVIAIGREAVAIGRNSYNDPAPNSWFDVFDVDTWMSLTASSLRFQGKEAFRYDDSYLRINKGKMFSSGVHFDDSAVVTTGDMHARLFRSSYATGGAIPDGADIAYRVNNTNDNYIRFATRNNVAAWLAGDDHFVLKSTTASNSLGDSAWIAGYADANNRDHIWHDEGSNTWHFVSDSPFKAAGNSTIRSGGVISSGLSKFTGRVMFGGDGNHNGQNANLAISVGDADTGIRWNSDGNMDLMANSVAALNVTNTRVRASIDIETAAKVRSTNYDVYTGEGRGIRFWNGSDSYKIYMSGHAGSDAGRIDPSSDYNMYFKMTSGNRGFVFKNNTNNFVHLTPAKSYFKGRMEIKDSANDLEPALLVQKRADVGNGGAALLVATYGETTDIILEGRANATGTATDVTGRASTSTSGDMKFQIWASGNANFKGNVTAYGSASDITLKENIKPITNAVDKTLKLNGCTFNYIERPDDILAGVIAQDVQKVMPELVYRTPDNKLAVRYGNMAGLFVEAIKELKTENDRLKSTLDDVLARLAALEGK
Physico‐chemical
properties
protein length:1545 AA
molecular weight: 167063,08990 Da
isoelectric point:6,16438
aromaticity:0,09838
hydropathy:-0,44460

Domains

Domains [InterPro]
DC_1209
STR
333–575
DC_1209 DC_0000
IPR030392
CHP
1443–1532
IPR030392
IPR030392
CHP
1443–1496
IPR030392 Coil
YP_008125991.1
1 1545
Architecture
STR
STR
STR 333-575 | STR 895-1545
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008125991.1
1 1545
Domain Start End Length (AA) Confidence
N-terminal 1 548 548 0,0050
Central domain 549 772 225 0,4418
C-terminal 773 1545 772 0,7303
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-548
Central
549-772
C-terminal
773-1545

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmaP_AD45-P1
[NCBI] 		1300004 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas macleodii str. 'Balearic Sea AD45'
[NCBI] 		1004787 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Alteromonadaceae > Alteromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008125991.1 [NCBI]
Genbank nucleotide accession
NC_021532.1 [NCBI]
CDS location
range 20762 -> 25399
strand -
CDS
ATGTTTGACGTAAAAGACGGAATACAAATAAGCAAAAGTGTAGTCATTAACAAAGATAAAGATGTCTTTGCTAAAAAAGTTACAGCTTCTGGTGGGGCCGTGATAAATACAGGGTCGTGGAATAAAGACGGTCTGCGTCTTAACGGCGCTGCCCCTTCTATCTATTTTAGCCAAGATGATGGAAGTAATGCGTATTTAGGCCTTAACGGAGGTAACTTTTATGTTCTCCCTGATACTGACAGTAACGGGACCTACTCTAGTCCATACATACTACAAGCTAGTTTTAGCGGTAACGATTTTAGGTATTTCGGTCATAAGGTATACCACGCAGGTAACAAGCCTTACTTTAGTGAAATTATAGGCACTATCGATAATGGGCAACTGCCTAACGATATTACTGTGGGCGGTAATCTTGCAGGTTACAACGTTTATGCTGGTAAGGTAGGACTGACCACTAATGACGGTCATGGTAACGCAAACGTCACTTTTAACCATAGAAACGGCAGGCCTGTACAAAACGGCAACTCACTTCGTATCGAAACAAACGTAGATGGTACCTCAAACCCTGTTTTTGTTTTTGAAGCTGCGGCAAACGTTACTGCAGGTGAAGCTATAGTACTTAGTAATATAGCTACTTTGGGCCTTTCAGAGTTTACGTATAAAGGCAATGCTGTATACCACGCCGGGCGTAAACCTACTTACGGTGAACTAGGTACGATATACCACGGAAATGTAGATTTTGCTAACCAGTACTTAAACACAGGATCTAGTCCTACTTTCCTTAACGGTACCTTTACGGGAGAGTTAAAAGTAGAAAACGCGCAGCCTTGGTTAAGGTTAAACGACACTACCGGCAACAACGCTCGTATAAGAAATCAATCAAACGTTATTTACATAGACGCAGATAATGGGACAGGTAACGGCATACTACAGATAGGCAGCCTTAGGACTGACGGTATTCTTTTAGGCGATACTTCCGGCCCTTACCTGTATCGTTCTGACGTCGCAAAAAACCATTTTTCTTTACGTGTCGGTAATTCCGGTGCTTACAAATATTTAACGTTTAAAGGAGACGACGGGACTTTAGAGCTGGGCGGTCAGAGAGTTCTGACGGTTGGTTCAGGAAAAGCAGTAGATTCTGACAAACTTGACGGAGTAAACAGCTCTCAGTTTCTGCGCAGCGACGTAAGCAATACTTTATCTGCAAACTTACACGTTACTGGTAGTATTTCTTTTCCTGTAGGGGATAGCTTTGTAGGCGTAGACCAAGAGGAAAACTACTTAAGATATCGATTTGGTTCGACAGCAACCGCTAAAGGTGTGCGAATAGATGACTACGACACGCCTGTTATTGAGCTTAATCGAGACATAGCGTCAGATTTTAAAAGAGGCTTAAAGGTAAGCGGAAACGCTGTCTACCACAGAGGCGACAAGCAAGACTATATACCTACTTTAGGAAATCAGGCTCTTATGCCTACAGGCAGGAACGCGCTTGCCGAAGGTATTCACACTTACGGTACTAAGAACAACACGACTAATACTCCTCACGCCTCTAAGTACGGAGAGTCTATTGTGTGGGGTAGTGGTGCGGCAGGCTCTGTAGAAGTATGGGGAGGCTGGGTAGGCGCTGGTTGGGGCCGACTATACACAAGGGCGCTACGAAACGTTACTGATGATTGGTCTGATTGGTATGAGATATATACTAGCCGTGATGGGGTTCCTTTTGACAAGATCACTGGGCGCACACTCGCTCACATGAACGCTAGGGAAGGTTACTGGGGCCTTAACTCTAGTACTGATGGTTCTAACGGTAGTTGGATTCGCACACCTAGTGCCGGCCTGTTGCCATACCAGTCAGGCGTCTCTAGTTCTTTAGGTGCTTCTAGTTGGAAGTTCGATAACCTTCACGTTAAGAACGGGTACATGGACAATGCGACTGTCACAGGGTCTGTGAACGCTGGTAGTGGTAATTTTGGCTCTTTGAAAGCTAAAAACGACAACACTAACACCTTGATCATTGATAAGAGTTCTTCAAGTGTATATAGCGGTCTTCAATACGCAACAGGAGGTAAAGCCTCGTGGCTCTGGTATACGTCTAATAACGGTACTGAGGACTTCTCGCTCCAGACTCGTAACTTCAACACTGACGGTCAATATAGAGATACTGTCTTCAGTATTGATCATAGTAATGCTCAGATGAGGTTTATGCGCACAGGTCGTTTTGATGAGAGTCTGCGAGTGGATGGCTGGGTGTTATCAGACCGTGTAAGGAATATTAGCGGTACTGGTATGTACATCTACGGTGGTGATATGTCGAGCCAGCATGATGCTATACAGTCAAAGTACGGCGAAGGCGAGCTTATCTACCTGGCTGCCGAAGGTGGTGTTCAGATACTTTCTAGCGGAGATAACCTTAATAACAACGGTCAAGCAGCAGATACTTTGACAAATGACAGACGCGTTGTTTTGTGTGACAGCGGAGGCAACTCTCGCTTTTACCAAGGTACAGTAACTGTAGACCAGATACATGCCGGTAACGGACAGATTGCGCCAAGCGCTGCAAAGCTGCAGGTCAAGGGTATTCAACGCACAGGTACTTTGTATTTGCATGAAGGAGATAACCCAGGACCAAACACTGAAGTAATCCTTTCTAGTCAGGCAGGAGGCACTAGGTTACGAGTAGCTACCAAAGACGGGTATATAGATGTAGGTCCGCAAAACAGCAGTTACGCACATCTTACTACTAATTTGGATAGATTTTATTTTAATAAAGAGATCCAAGTTAACGGTGATATTAAAGTTTATAACAAACTGTCAAAATTTACCGCTGACGGGAAGAATCTAATCGTCGGGGCTGATTCTAATTACTTCTCGCGTTTTACTGACGCAGGTAAGATATCCAGAAAAAACAGCGGTTGGGATAACAACTCTGCTGAAGTCGACATATTCAAATCAGCATGGATGAGTCATTTAGGCGACCACATACTGATACGTCCTACAGGCAATCAGGTAAACAACGGCGTTATAGCTATCGGACGAGAGGCTGTCGCTATAGGCAGAAATTCATACAATGACCCTGCCCCAAACAGCTGGTTTGATGTATTCGATGTAGATACTTGGATGAGTCTTACTGCGTCGTCTTTACGTTTCCAAGGCAAAGAAGCTTTTAGGTATGATGACAGCTACCTTAGAATCAACAAAGGTAAAATGTTTAGCTCAGGCGTACATTTTGACGATAGCGCTGTAGTCACTACTGGAGACATGCATGCCCGTTTGTTTAGAAGCTCTTACGCTACTGGTGGTGCTATACCTGATGGAGCAGATATCGCTTATCGCGTAAATAATACCAATGACAACTACATCAGGTTTGCTACACGAAACAATGTCGCTGCTTGGCTGGCAGGAGATGACCACTTTGTGCTGAAGTCTACTACAGCTTCTAACTCTCTTGGCGACAGCGCTTGGATAGCTGGTTACGCTGATGCAAATAATCGCGACCATATTTGGCATGATGAAGGTAGTAACACATGGCACTTTGTATCTGATTCGCCTTTTAAGGCTGCAGGTAACTCAACCATACGCTCAGGTGGCGTCATATCAAGCGGTTTGTCTAAGTTTACCGGCAGAGTGATGTTTGGCGGTGATGGTAACCATAACGGTCAAAACGCTAACCTAGCAATCTCTGTAGGTGACGCCGACACAGGTATTCGTTGGAACAGTGACGGTAACATGGACTTGATGGCGAACAGTGTTGCCGCTTTAAATGTTACTAATACTCGCGTAAGAGCTTCTATAGACATAGAAACTGCGGCTAAAGTAAGGTCGACTAATTACGATGTTTACACTGGCGAGGGTAGGGGTATCCGTTTTTGGAACGGATCTGACAGTTATAAGATTTACATGTCTGGGCATGCTGGTAGTGATGCAGGAAGAATAGACCCTTCTAGCGACTACAACATGTACTTTAAAATGACTAGCGGGAATCGAGGGTTTGTGTTTAAGAATAACACTAACAATTTTGTGCACCTTACTCCTGCTAAAAGTTATTTTAAAGGCCGCATGGAAATTAAAGATTCGGCTAATGACCTTGAACCTGCACTGCTAGTGCAAAAAAGAGCTGATGTAGGTAACGGAGGTGCTGCACTGCTAGTAGCTACCTACGGCGAAACTACTGATATTATTTTAGAAGGCCGGGCTAACGCTACAGGTACTGCTACTGACGTTACAGGTAGGGCTTCTACTAGCACATCTGGAGACATGAAGTTTCAGATATGGGCTAGCGGCAATGCTAACTTTAAAGGGAATGTTACTGCTTACGGAAGCGCTTCTGACATTACTCTTAAAGAGAACATAAAGCCTATCACTAATGCTGTAGATAAAACGCTCAAGCTTAATGGCTGTACGTTTAACTACATAGAACGTCCTGATGACATTCTTGCAGGTGTTATTGCTCAAGACGTACAGAAGGTGATGCCAGAACTAGTGTACCGCACACCGGACAACAAGCTGGCTGTTCGTTACGGTAATATGGCAGGTCTTTTTGTTGAGGCTATTAAAGAGCTTAAAACAGAAAATGACAGACTTAAAAGCACCCTAGATGACGTGTTAGCGCGACTAGCTGCTTTGGAGGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
24dc672195d79ef5dec3af3fb06ed0d773a972b12c3a615a0d6c031e2db9b2c9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50