Protein

View in Explore
Genbank accession
AOO07399.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MSQLNVDRIVSLGGGGGTAAIQLESSGNFNFDTGTLYVDSTNGEVGINTTTPRATLDIASTDSVIVPVGTTAQRSGAPIEGMFRYNSTDRTFEGYAFNAGANAVQWGPIAGAGGGLPDQSTDRYSPDFTEGAVLRSDGTDAYWDISGAPTGWTMSRIWTHGYVGGGYQSGSPWRNVNRTVHATDTSTNLGDTLDRSGAYMAGSFTDNRHYFHSMENTYRGSSNYTSGFSMTTEAGITHQGSWDMTVSRGSMGSFQDHEFAGGYSYLLGGGNARTDSMNLKTDVMRTSGYPQNHADGGDDPTHGGNARLKGWYKRSGTRQALVWNTESWVTWDNGPGGDGWKKILGTMLGHMYVGTGNNNQNGNQRVEDTTGLQTRGLNFGNMGEENFEMGMRKGYCLGNYNGSQNNNTFKVNYGTDAYNNLGGASPPSGHGGMSSAHCSSASAISGVNDAGTALYDYGTNIPNY
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49367,79690 Da
isoelectric point:5,22904
aromaticity:0,10345
hydropathy:-0,64655

Domains

Domains [InterPro]
DC_0841
STR
1–270
DC_0841
IPR059888
RBD
46–111
IPR059888
AOO07399.1
1 464
Architecture
STR
STR 1-270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO07399.1 [NCBI]
Genbank nucleotide accession
KX349272 [NCBI]
CDS location
range 30831 -> 32225
strand +
CDS
ATGTCTCAATTAAATGTTGACAGAATAGTATCTTTAGGTGGAGGTGGTGGTACTGCTGCCATTCAGTTAGAATCTAGTGGTAACTTTAACTTTGATACTGGCACACTGTACGTTGACAGTACAAACGGCGAAGTTGGTATCAATACAACGACACCCAGAGCAACTCTCGACATTGCTTCTACTGATTCTGTAATCGTTCCCGTAGGTACTACTGCACAAAGATCTGGTGCTCCTATTGAGGGCATGTTCAGATATAACAGCACAGACAGAACATTTGAGGGTTATGCCTTTAATGCTGGTGCGAATGCTGTTCAGTGGGGTCCTATTGCTGGTGCTGGCGGAGGTCTTCCCGACCAATCTACCGATAGATACAGTCCAGACTTCACCGAAGGTGCAGTATTACGTTCTGATGGAACTGATGCTTACTGGGATATTTCTGGTGCGCCAACTGGTTGGACCATGAGTAGAATCTGGACGCACGGTTATGTTGGTGGTGGATACCAAAGTGGTTCACCATGGAGAAACGTAAACCGTACAGTTCACGCTACAGATACATCTACAAACCTTGGTGATACTCTGGATAGATCTGGTGCTTATATGGCAGGATCTTTTACAGATAATAGACATTATTTCCACTCGATGGAGAACACTTACAGAGGTTCTTCTAACTATACTTCTGGTTTCAGTATGACAACTGAGGCGGGTATTACGCACCAGGGATCATGGGACATGACTGTAAGTAGAGGTTCCATGGGTTCATTCCAAGACCATGAATTTGCTGGCGGTTATTCTTATCTTCTGGGTGGTGGTAACGCTAGAACTGACTCGATGAATCTCAAAACTGATGTTATGAGAACATCTGGTTATCCTCAAAACCATGCTGATGGTGGTGATGACCCCACACATGGTGGTAACGCAAGACTGAAAGGTTGGTATAAGCGTTCTGGAACACGTCAAGCACTTGTATGGAATACTGAATCTTGGGTCACCTGGGATAATGGTCCTGGTGGTGACGGATGGAAGAAGATTCTCGGCACGATGTTAGGTCACATGTATGTTGGCACTGGCAATAACAACCAGAATGGTAATCAGCGTGTTGAGGATACAACTGGACTTCAGACAAGAGGTTTGAACTTCGGTAACATGGGTGAGGAAAACTTTGAAATGGGTATGAGAAAGGGTTACTGCTTAGGTAACTACAATGGTTCTCAGAATAACAACACCTTCAAGGTGAACTACGGCACAGATGCTTACAACAACCTTGGTGGTGCTTCTCCACCATCTGGTCATGGTGGCATGAGTTCTGCACACTGTTCATCTGCATCTGCTATCTCTGGTGTCAATGACGCTGGAACTGCATTATATGATTATGGTACAAATATCCCTAACTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
56cdfcf3a778967369dba23defe441e9766e05af6ed2b6440c17d5d3da1e8211
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50