Protein

View in Explore
Genbank accession
AJA41367.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MQYNFRGKYNSTTSYVKKDVVSYQPTPNDPIKYYFCLTDNVGQLPNPNGDTQYWAIINTLSNFPNSVDTFLNHTNIQASDKASLQRFQELSLKTTLTPAEQDELSTLTQNLRDKLILPEDFNALQQSISNLQMFFKDNVEGYINQKQAEFQSQIDKFTDRGEYNSTITYYKNNFVTYQGQTYICTVDGTINIPPTNTSNWRLVAAKGQKGDKGDPGLNLVYKGTYDPTIQYTIGDAVEYGGSIYYATQDNIGETPQSNGTSWTIFMPRASILVSPTPPSSPTDKLVWVDSINNKFKYYDSATASWKELYKVEIDDISNKIGNLSNLQTTDKDSLVDAVNEIKQEQVSHSADTAAHGIGDKSTLLTTNKNTIVEAINELFTFANDGKTGVATVIGSPATAGDTFSQLVTLIQNIKNTMAANLTAKGVTVNGNDPLLNLANAIASIQVGKKFQSGVTTSTETMIQYTRDDTGYTTGRYSVTATGLTFMPSTVVLVYQSGSLWYIDALFPSKVPNAINADGRIVSSNVPFRLIAPASVTSNSFTLPCNASSVTVYWYAFE
Physico‐chemical
properties
protein length:557 AA
molecular weight: 61376,58360 Da
isoelectric point:4,95735
aromaticity:0,10413
hydropathy:-0,36679

Domains

Domains [InterPro]
DC_1934
STR
1–223
DC_1934 DC_1369 DC_1978
G3DSA:2.10.10.90
STR
161–265
G3DSA:2.10.10.90
DC_1737
ATT
212–255
DC_1737
AJA41367.1
1 557
Architecture
STR
ATT
STR
STR 1-211 | ATT 212-355 | STR 360-554 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Geobacillus virus E3
[NCBI] 		1572712 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJA41367.1 [NCBI]
Genbank nucleotide accession
KP144388.1 [NCBI]
CDS location
range 43023 -> 44696
strand +
CDS
ATGCAATATAACTTTAGAGGAAAATATAATAGTACAACATCTTATGTAAAAAAAGATGTTGTATCTTATCAGCCTACACCTAATGATCCGATTAAATATTATTTTTGTTTAACTGATAATGTAGGTCAATTGCCTAATCCTAATGGCGATACTCAGTATTGGGCAATTATTAATACTTTAAGTAACTTTCCTAATTCTGTTGATACCTTCCTTAATCATACAAACATTCAAGCAAGTGATAAAGCAAGTCTTCAACGATTTCAAGAGTTATCTTTAAAAACTACACTAACACCTGCTGAACAAGATGAATTATCAACTTTAACACAAAATTTAAGGGATAAACTAATTCTTCCAGAAGATTTTAATGCGCTACAACAATCAATTAGTAATTTACAGATGTTTTTTAAAGATAACGTAGAGGGCTATATTAATCAAAAACAAGCTGAATTTCAATCACAAATTGACAAATTTACAGATCGTGGAGAATACAATTCAACTATTACATATTACAAAAACAATTTCGTTACATATCAAGGTCAAACTTATATTTGCACAGTTGATGGAACAATTAATATTCCTCCTACTAATACTTCAAATTGGAGATTAGTAGCTGCAAAGGGACAAAAAGGTGATAAGGGCGATCCCGGATTAAATCTCGTATACAAAGGCACATATGACCCAACTATACAATATACAATTGGTGATGCAGTAGAATACGGTGGAAGTATTTATTATGCTACACAAGATAATATTGGTGAAACTCCACAGTCCAACGGTACAAGTTGGACTATTTTTATGCCTAGAGCGTCTATATTAGTCTCCCCTACTCCACCAAGCTCACCAACAGATAAATTAGTTTGGGTGGATTCAATAAACAATAAATTTAAATATTACGATAGTGCAACCGCAAGCTGGAAGGAACTCTACAAAGTCGAGATAGATGATATAAGCAATAAAATCGGAAATTTATCTAATTTACAAACGACTGATAAAGATAGTTTAGTAGATGCCGTGAATGAAATTAAACAAGAGCAAGTGTCGCATTCGGCTGATACTGCGGCACATGGTATTGGTGATAAATCTACATTGCTTACAACGAACAAAAACACAATCGTTGAAGCAATTAACGAACTTTTTACATTTGCCAATGACGGGAAAACGGGTGTCGCCACCGTCATTGGAAGTCCAGCCACAGCAGGCGACACGTTTAGTCAGTTGGTGACACTTATTCAGAACATTAAAAATACGATGGCAGCGAATTTAACAGCGAAGGGCGTTACCGTGAATGGAAATGACCCGTTATTGAACTTAGCGAATGCGATTGCGAGTATTCAGGTGGGGAAGAAGTTTCAAAGTGGTGTCACAACTAGCACAGAAACAATGATTCAATACACAAGAGATGACACAGGATACACTACGGGCAGGTATTCAGTTACGGCTACAGGTTTAACATTTATGCCTAGTACAGTCGTTTTAGTGTATCAAAGCGGTTCGTTATGGTATATTGATGCTCTTTTTCCTTCAAAAGTCCCAAATGCTATAAATGCCGATGGGCGAATTGTATCTAGTAATGTACCTTTTCGTTTAATAGCGCCAGCTAGTGTAACAAGTAACAGTTTTACTTTACCTTGTAATGCATCTAGCGTAACCGTTTATTGGTATGCCTTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4bf5b83ab9a0c3b8e2b61d845c1b6d4f58add5cb5246ec1e33f0f37456bcfb34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of a novel Geobacillus thermoglucosidasius bacteriophage, GVE3 van Zyl,L.J., Sunda,F., Taylor,M.P., Cowan,D.A. and Trindade,M.I. 2015 26123922 GenBank