Protein

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Genbank accession
AXH70894.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MLVFDTLVQAASVGTSETNYIYVKETQKFYKVTFKENAIRKSVPHNQDTHLLEEALPNLDEFFKTDASKLIFNDVSGRHRVTNSISSDPEEPGTLLLKQDMTKDNLSINAVEINYITQNLDELLETRHYSAGNASSGRHANSPLITGGTERVLVKVMRLPQINGKTFVRQEIHQGHAVNASTKVTFWHRIIELNSNGTIANKSDWLEATIGKSAMDLDGSTNYADVATGTGNVSAGTNTVLSISGVRKGKYLMCAEFNCRAQGSTAGTMVLRPRINSADIPIDDDATIAITGELVGNTDSSFAEYSSVSYHGLINVPSNSSQVQVAVDISIDYRVNSDQNARPNLFLYHLPDFS
Physico‐chemical
properties
protein length:354 AA
molecular weight: 38809,85810 Da
isoelectric point:5,57957
aromaticity:0,07062
hydropathy:-0,31582

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70894.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,6717
Central domain 173 343 172 0,0014
C-terminal 344 354 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-343
C-terminal
344-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70894.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 163266 -> 164330
strand +
CDS
ATGTTAGTTTTTGATACTTTAGTCCAGGCTGCCAGTGTTGGTACCTCGGAAACTAATTACATTTATGTCAAGGAAACTCAAAAGTTTTACAAGGTTACTTTCAAAGAAAATGCAATAAGAAAATCCGTTCCTCATAATCAAGATACTCACTTGCTTGAAGAAGCACTGCCCAATCTGGATGAGTTCTTTAAAACCGATGCCAGTAAGTTAATTTTTAATGATGTCTCAGGTCGCCATCGAGTAACAAATAGCATTTCAAGTGATCCTGAAGAACCAGGCACGCTACTTTTAAAACAAGATATGACTAAGGACAATCTGAGTATTAATGCGGTAGAGATCAATTATATCACTCAGAATCTGGATGAGTTATTAGAAACAAGACATTACTCGGCCGGCAATGCCAGTTCTGGACGCCATGCAAACAGTCCTCTAATTACGGGAGGCACTGAAAGAGTATTAGTAAAAGTAATGCGGTTGCCTCAGATAAACGGAAAGACGTTTGTGCGCCAAGAAATACACCAGGGCCATGCGGTTAACGCAAGCACCAAGGTAACCTTCTGGCATCGCATTATAGAACTCAATAGCAATGGAACGATCGCCAATAAGTCAGATTGGCTAGAAGCAACGATTGGCAAATCTGCAATGGATCTAGATGGATCCACCAATTATGCTGATGTAGCAACAGGCACGGGCAATGTGAGTGCTGGTACCAACACGGTATTGTCCATAAGCGGCGTGCGCAAAGGCAAGTATTTGATGTGCGCTGAGTTCAATTGTCGAGCACAAGGCAGTACGGCAGGTACAATGGTTTTAAGGCCTCGTATAAATTCTGCAGATATCCCTATCGATGACGACGCCACTATTGCAATCACTGGTGAGCTGGTAGGAAATACGGACAGTAGCTTTGCTGAATATTCGTCAGTTAGTTATCACGGATTAATCAACGTACCTAGTAATTCTTCTCAGGTTCAAGTGGCTGTAGATATTAGCATCGACTACCGTGTGAATAGTGACCAGAATGCCAGGCCAAACCTGTTCCTTTATCATCTTCCTGATTTCTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dd0c3087280e4e1c30865b56940c3fc2344c32674e252e5d1d55b5b7da9d9eae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank