Protein

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Genbank accession
XPP57296.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MRVENIQADNIIVERGVRVYSPNNKPSASDIGALPSNGKAADAIKSDTVSGTNLGKTDTPYITIPNAAWYADAPIGKSQMVKSDSYRLPITASGYVFKIGARDVSGGSSWIFSTDYAGVATRVFFGTCETSSHDPKWHEVYSPNHKPTAADVGAHPTSWKPTWNDVQSKPAQATRWPSWNEVTGKPSTIPPSSHTHPWSQITGEPVYTQRWPNWNEVSGKPGNLLTQTTADTRYLGKNSKASSATNSDKLGNVSSAGYQRVESGSIPHPLGGKFTTTTSNLTGPIKIVLPAATAFKASMLGFTVNVYNYSTNTAFQLRISGYDYTNKSWINCSAQMISGARDVQVRFGNNGSRACIYVGSNSEQWSYPQVTISDFLGGYSGGTSSNWRTGWEIYVGGQTAENVSYDTVAYAPYTAGKKPSAGDVGAYTKGEADGRYLGKNNSAASIRSHGKVTALSGSTVPPSGVRLIEAYNNGYPDTYGNVLQVRGNGSGEIFLGWSGNSGGHAPMYIRSKRDVSGAPWSGWARVYTTAQKPTLAELGAQATLSPENRRKITYGTGNPSGGSSGDIYIQYK
Physico‐chemical
properties
protein length:572 AA
molecular weight: 61254,92290 Da
isoelectric point:9,34574
aromaticity:0,10315
hydropathy:-0,53164

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP57296.1
1 572
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,9261
Central domain 41 239 200 0,3254
C-terminal 240 572 332 0,5062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-239
C-terminal
240-572

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Pylo
[NCBI] 		3388594 Viruses >
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP57296.1 [NCBI]
Genbank nucleotide accession
PQ768830.1 [NCBI]
CDS location
range 33739 -> 35457
strand +
CDS
ATGCGCGTAGAAAATATACAAGCAGATAATATTATAGTAGAAAGAGGGGTGAGAGTATACTCGCCTAATAATAAACCAAGTGCCTCTGATATAGGGGCCCTACCTTCTAATGGTAAGGCAGCAGACGCTATTAAATCTGACACAGTATCTGGTACAAATCTAGGTAAAACAGACACACCATACATTACTATCCCAAATGCCGCGTGGTATGCTGATGCACCTATTGGTAAATCTCAGATGGTTAAGTCCGACAGCTATAGACTACCTATAACTGCCAGTGGGTATGTATTTAAGATTGGTGCTCGTGATGTATCCGGTGGTAGCAGCTGGATATTTAGTACCGATTACGCTGGTGTTGCTACTAGGGTATTCTTCGGCACATGTGAAACGTCTAGTCATGATCCAAAATGGCACGAAGTCTATAGTCCTAATCATAAACCAACAGCAGCAGACGTAGGTGCTCACCCAACATCATGGAAACCTACTTGGAATGACGTACAAAGTAAGCCCGCTCAAGCAACTAGATGGCCTAGTTGGAATGAGGTCACTGGTAAGCCTAGTACAATACCACCAAGTTCACATACCCATCCATGGTCACAAATTACTGGTGAGCCTGTGTACACACAGCGTTGGCCTAATTGGAACGAGGTATCAGGCAAGCCGGGTAATCTACTTACCCAAACTACTGCTGATACTCGCTATCTTGGTAAGAATAGTAAAGCTTCTAGCGCTACCAATTCAGATAAGTTGGGTAATGTAAGCTCTGCCGGCTACCAAAGAGTAGAGTCAGGTAGTATCCCACATCCTTTAGGGGGTAAATTTACTACTACTACAAGTAACCTAACAGGACCTATTAAGATTGTATTACCAGCTGCTACAGCATTTAAAGCCAGTATGCTAGGTTTCACGGTAAACGTTTATAACTACAGTACGAATACTGCATTCCAGCTCAGAATATCAGGGTATGACTACACTAACAAGTCATGGATTAACTGTAGTGCTCAGATGATATCTGGGGCTAGAGATGTGCAGGTTAGGTTTGGTAACAACGGTTCCAGAGCTTGTATTTATGTTGGTTCTAACAGCGAGCAGTGGAGTTATCCACAAGTAACCATCAGCGATTTCCTAGGTGGATATAGTGGTGGTACTAGCTCTAATTGGCGTACTGGTTGGGAAATCTATGTTGGTGGCCAAACTGCGGAGAATGTTAGCTATGATACTGTAGCTTACGCCCCCTATACAGCAGGCAAAAAACCTAGTGCAGGTGATGTTGGGGCATACACCAAAGGTGAAGCTGATGGTAGATATCTAGGAAAAAATAATTCTGCAGCATCCATTAGAAGTCACGGTAAGGTTACGGCCTTATCAGGATCTACCGTACCACCAAGTGGGGTTAGATTAATCGAGGCGTACAATAACGGATATCCAGATACTTATGGTAACGTATTACAGGTACGTGGTAATGGTAGTGGTGAGATCTTCTTAGGGTGGTCAGGTAATTCTGGCGGACACGCCCCTATGTACATTCGCAGTAAAAGAGATGTAAGTGGAGCCCCTTGGTCTGGGTGGGCTAGAGTATATACTACAGCACAGAAACCCACCCTAGCAGAGTTAGGTGCCCAAGCTACTTTGAGCCCAGAAAATAGACGCAAGATTACTTATGGTACTGGTAACCCTAGTGGTGGTTCTAGTGGTGATATTTATATTCAATATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a146d0fe207067eccf6b9d0e1a5b5052738b08c0aae86c82b680392459b793eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6782
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50