Protein

View in Explore
Genbank accession
QZI86351.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTTKVNNRMIDTDVANMTDYGAVEGGDLSPILNYMLAQGLKHINVDVESGTFGSKIDDMENVTLSGLGMGRTLLTRTFDGLLFDLGNYCELRNMQITGGVALIAKVLTGTAGLFIDRCRLIPDGGYAAVAMESDTVSTYFANSIFGSGDTRVGGLAMVTGATDGNGVRHITDCSGAGNPLADLTGMDDVFITGGFSTNGLIFDDTTSKIFINNMRWGVSTSNPITRLEIRGENISIDNEVGLPLDLYCSSSQISTVTPGGYDINDYGSGNMVEVRARAYTPVLTGSGGITPSLGSGSLNGIYSRAGNKITVNLELIWAADSVLGNGQFIFSLPDSMPVVQNLGLQQYSGTGIVRSSTNLLVNARFNNNTRTFTLEGVDNSGNRVDVGVSTP
Physico‐chemical
properties
protein length:391 AA
molecular weight: 41268,84620 Da
isoelectric point:4,47672
aromaticity:0,06905
hydropathy:0,00870

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86351.1
1 391
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,9601
Central domain 28 226 200 0,9416
C-terminal 227 391 164 0,9555
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-226
C-terminal
227-391

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS32B.3
[NCBI] 		2859296 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86351.1 [NCBI]
Genbank nucleotide accession
MW865301.1 [NCBI]
CDS location
range 1 -> 1175
strand -
CDS
ATGACTACTAAAGTTAATAATCGAATGATTGACACTGACGTCGCTAATATGACAGATTACGGCGCAGTTGAAGGAGGAGATCTTTCCCCTATCCTCAACTATATGTTGGCTCAAGGTTTAAAACATATCAATGTCGACGTTGAGTCAGGAACGTTCGGGTCAAAGATTGACGATATGGAGAACGTAACCCTTAGCGGTTTAGGTATGGGACGTACTCTCTTAACCCGAACGTTCGACGGTTTGCTGTTCGATCTCGGCAATTATTGTGAACTACGTAACATGCAAATCACTGGAGGTGTAGCCCTCATAGCTAAAGTTCTTACAGGAACCGCTGGCCTATTCATAGACCGTTGCCGTTTAATTCCAGACGGAGGCTATGCGGCTGTGGCTATGGAAAGTGACACGGTGTCAACTTACTTTGCTAACTCCATCTTTGGTTCTGGGGATACTCGTGTCGGGGGCCTAGCAATGGTAACAGGGGCTACCGACGGCAATGGTGTTCGGCATATTACTGACTGCTCAGGTGCAGGGAACCCCCTCGCAGACCTCACAGGAATGGATGATGTGTTTATCACAGGAGGCTTTTCAACTAATGGTTTGATCTTTGATGATACAACATCTAAGATCTTCATTAATAATATGAGATGGGGTGTCTCTACTTCCAACCCTATCACACGTCTTGAAATCCGAGGGGAGAACATTTCAATTGATAATGAAGTGGGACTCCCTTTAGACCTCTATTGCTCTTCAAGTCAGATTAGTACAGTTACTCCCGGAGGTTATGATATCAATGACTACGGGTCGGGCAACATGGTAGAGGTTCGCGCTAGGGCATATACTCCTGTCTTAACAGGCTCTGGTGGGATAACTCCTTCTCTTGGAAGCGGCTCTCTTAATGGCATATACAGCCGTGCAGGGAACAAGATCACTGTCAATCTTGAGTTAATTTGGGCAGCTGACAGTGTGTTAGGGAATGGTCAGTTCATTTTTAGCTTGCCTGATAGCATGCCGGTTGTTCAAAACTTAGGTCTCCAGCAATACAGCGGTACAGGTATCGTTCGCAGCAGTACAAACCTCTTAGTTAACGCACGTTTCAATAACAATACACGAACTTTCACTTTAGAAGGTGTCGATAATTCCGGTAATCGTGTGGATGTAGGGGTAAGCACTCCCTT

Genome Context

Genome Context

Tertiary structure

PDB ID
f9febd6661b1a82e9c52496b0c4619e95fa758e402a46b5240f1ec99b3a04e50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7131
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank