Protein

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Genbank accession
QPB10092.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MALIIHYTRNENGGFNTAQHYTEPMVFVTERIPDGVPFTIYRDSVGEDNNVTEDFDALRHPGTFHIIEGAGGGVVSGAFKLLGAVLSPIMKLLTPSTAAAQSFSNVQGESPNNSLTDRNNKPRPYERVYDICGTVQSIPNNLMTTYNVFNAAGRTIEYGYYCVGRGLLDIHAADVTDGDTVLQNIPGSSAYIYGPYNSPNSGSPQLAIGDPIDQGLYITVSSNEIDGQTLKAPNDLSSRMTDGATAVYSSGVGIITDPSGGADFTAYIKVGDSVVFKNVFVDGVADLNAIYTVTDISTVSITVDPSPKLSQWVNVGGTPQPLKISDNPTIEPYDTKEASFTPWTSITRIKPERLLINISAPNGMYLDWGAGKLFLATDFEAEYQLLDDNDNPYGPIYAQQATVSGRSGDEVGTTLYAVLPVASKVRVRVRRVTPFQFDYNGVVVDELKYNDLFAQIADNTPHYGNLTTVHTARLQTARATAVKQPQLKIVCTEMVQKYLGAGQFDPAWTPNTQAVQSLIRLLRDPVVGGLDLTAANMDALTATQAEIESYFGNVLAGQFCYTFDTYTTTAQDIIEAIAEAVFCRAYREGKSILLDFDRPRPGPEMVFTHRSKIPGQEKWTRSFNDQGSFDSVKFSYIDPDTNTKETITIPEDGGVKTDTYDSKGVRNYQQAYWLAHRRYQMIKLKRVAVDFSATEEGALVRPGRAISVVKGSRVAPYDGYIVAADGLTLTLSQEVAFSAGEAHSIILKKRDGGVQSVPVVAGPSARKVIMLAAPEEAVYTGNSALKTEFSFGSDSRHGAQMILVQTVTPNDDRTVKITGFNYHPDYYLQDGVAPFGRAFSNGFDTGFS
Physico‐chemical
properties
protein length:848 AA
molecular weight: 92328,25120 Da
isoelectric point:5,01470
aromaticity:0,09788
hydropathy:-0,23208

Domains

Domains [InterPro]
DC_0118
STR
1–681
DC_0118 DC_0808
NF040662
Unmapped
352–827
NF040662
QPB10092.1
1 848
Architecture
STR
RBD
STR 1-681 | RBD 699-842 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB10092.1
1 848
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9909
Central domain 233 431 200 0,3199
C-terminal 432 848 416 0,0885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-848

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Smarc3
[NCBI] 		2777233 No lineage information
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB10092.1 [NCBI]
Genbank nucleotide accession
MT980832 [NCBI]
CDS location
range 21507 -> 24053
strand +
CDS
TTGGCGCTAATAATCCATTACACCCGCAACGAAAATGGCGGGTTCAATACCGCGCAGCACTACACTGAACCAATGGTGTTCGTTACCGAGCGCATTCCTGACGGAGTGCCATTCACTATTTACCGCGACTCGGTAGGCGAAGACAACAACGTGACTGAGGATTTCGATGCGCTGCGCCACCCCGGCACGTTCCACATCATCGAAGGCGCAGGCGGCGGCGTCGTGAGCGGAGCCTTTAAATTGCTCGGCGCAGTGCTGAGCCCAATCATGAAATTGCTCACCCCATCCACGGCAGCGGCGCAATCATTCTCTAACGTGCAAGGCGAAAGCCCTAATAACAGCCTGACAGACCGCAATAATAAGCCCCGCCCATATGAGCGCGTCTACGACATTTGCGGCACGGTTCAGAGTATTCCTAACAACCTCATGACCACCTATAACGTGTTCAACGCCGCCGGGCGCACGATCGAGTACGGCTATTACTGCGTCGGGCGCGGGCTGCTAGATATTCACGCTGCCGATGTTACCGACGGTGACACGGTGCTGCAGAACATCCCTGGATCGTCCGCGTACATCTACGGCCCTTACAACTCGCCTAACAGTGGATCGCCGCAGCTGGCGATTGGCGACCCGATCGACCAGGGGCTTTACATCACCGTGTCGTCTAATGAGATCGACGGTCAGACCCTGAAAGCGCCGAACGACCTGTCGTCACGCATGACAGATGGTGCAACGGCAGTATACTCCAGCGGAGTCGGCATTATCACTGACCCTTCCGGCGGCGCCGACTTCACGGCCTACATCAAAGTGGGCGATAGCGTGGTGTTTAAAAACGTGTTTGTAGACGGCGTGGCCGACCTCAACGCTATTTACACTGTTACCGACATCAGCACCGTGTCAATCACCGTCGACCCGTCGCCGAAGTTGTCTCAGTGGGTTAACGTGGGCGGCACCCCGCAGCCATTGAAGATTTCCGACAACCCGACGATCGAGCCATACGACACCAAAGAAGCGTCGTTCACCCCATGGACGTCGATCACCCGCATCAAGCCCGAACGTCTGCTGATCAACATCAGCGCCCCTAACGGCATGTATTTGGATTGGGGCGCTGGCAAGCTGTTCCTGGCCACTGATTTCGAGGCAGAGTATCAACTACTGGACGACAACGACAACCCTTACGGGCCCATCTACGCGCAGCAGGCCACCGTATCCGGGCGATCGGGTGACGAGGTAGGGACTACGTTATATGCCGTGCTGCCAGTGGCCAGTAAGGTGCGCGTACGCGTACGTCGCGTAACGCCGTTCCAGTTCGACTACAATGGTGTGGTAGTTGACGAGCTGAAATATAACGACCTGTTCGCGCAGATCGCCGACAACACGCCGCATTACGGCAACCTGACAACCGTGCACACCGCCCGCCTGCAGACCGCGCGAGCAACGGCGGTAAAACAGCCACAGCTTAAAATCGTGTGCACGGAAATGGTGCAGAAATATCTGGGCGCCGGCCAATTTGACCCCGCATGGACGCCAAACACGCAGGCCGTGCAGTCGCTGATCCGCCTGCTGCGCGACCCGGTAGTCGGAGGATTAGACCTGACCGCCGCTAATATGGATGCCCTGACCGCGACGCAGGCCGAGATCGAATCATATTTCGGTAACGTTTTAGCGGGGCAATTCTGCTACACGTTCGACACCTACACCACGACGGCGCAGGACATTATCGAGGCGATCGCCGAGGCGGTATTCTGCCGTGCGTATCGTGAAGGAAAAAGCATCCTGCTTGACTTTGACCGCCCGCGCCCTGGCCCTGAAATGGTGTTCACGCATCGAAGCAAGATTCCGGGGCAGGAAAAATGGACGCGATCGTTCAATGACCAGGGCAGTTTCGACAGCGTGAAGTTCAGCTATATCGACCCGGACACGAACACCAAAGAGACGATTACCATACCGGAAGATGGTGGGGTTAAAACCGACACCTACGACTCTAAAGGCGTGCGCAACTATCAACAGGCGTATTGGCTGGCGCACCGCCGCTACCAGATGATCAAATTAAAACGCGTGGCCGTCGATTTCTCGGCAACAGAAGAAGGTGCCTTGGTGCGCCCAGGGCGTGCGATCAGCGTGGTTAAAGGGTCGCGCGTAGCACCGTACGACGGCTACATTGTTGCTGCCGATGGGCTGACTCTTACGCTGTCGCAAGAGGTGGCGTTCTCGGCCGGCGAAGCGCATTCGATCATCCTTAAGAAGCGCGACGGCGGCGTTCAGAGCGTTCCGGTGGTCGCGGGCCCTTCCGCGCGAAAAGTAATCATGCTAGCCGCCCCGGAAGAGGCCGTGTATACTGGCAACAGCGCGCTAAAAACAGAATTTTCCTTCGGCAGCGATAGCCGCCACGGGGCGCAGATGATTTTAGTGCAGACTGTAACCCCAAACGATGACCGCACGGTTAAAATAACGGGCTTCAACTACCACCCTGATTATTATCTGCAGGACGGAGTGGCGCCATTCGGCCGCGCGTTCAGCAATGGTTTTGATACAGGATTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c586283acd2c2ea447fd6ae18da4b864d81d10342938aa9a09a1a99c9b7cb848
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3072
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50