Protein

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Genbank accession
WBF69746.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFSDQGEQQINGWSSESDGLQKRPPTVWKKRLSAVNWVIPNNAKFHLINRDENEQYYIVFTGKEIMVFDLEGNQYAVSGVTDYVNTSKPRDDIRVITVADYTFVVNRRTVVAQGTTKANPTYNMKNRALINLRGGQYGRLLKVGINGGTKVEHQLPPGDNAKDDPPKVDAQAIGKALVDLLVVAYPNYTFTLGSGYIEIKAPAGTTINSVETEDGYANQLINAVLDTVQTISKLPLAAPEGYIIRIQGETNSSADEYFVKYDSAKKTWRETVEPGTITGFDASTMPHALVRQADGNFRFQTLDWTERGAGNDETNPMPSFVNSTINDVFFYRNRLGFLSGENVIMSRSAGYFAFFPKSVATISDDDPIDVAVSHPRISILKYAVPFAEQLLLWSDEVQFVMTSSGVLTAKSIQLDVGSEFAVSDNARPFAIGRSVFFAAPRGSFTSINRYFAVADVTDVKDADDTTGHVLSYIPNGVFDIQGSSTENFITVSTEGAPNKLFIYKFLFKDGVQLQASWSHWELEQGEQIMASACIGSAMYIVRKHGYGVDLEKLEFIKETVDIAGEPYRLHLDGKTTMVIPTNAFNPNTYTSSFDVGAAYGGVFPPAGKYVMVDSSGRFVQLPDTVWSSTRWVTVKGDWSGKTVFLGRVYKFTYAFSRFLIKYEDQNGTVTEDSGRLQLRRAWVNYQRTGALVMRVVNQHREFLNTLNGYKLGLQDIGQVNIGDGQFRFPMNGDALHTRLILESDYPTQVSIVGCGWEASYARKAKAI
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87671,72480 Da
isoelectric point:5,92776
aromaticity:0,11280
hydropathy:-0,26084

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
WBF69746.1
1 789
Architecture
TTP
TTP 1-789
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF69746.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9911
Central domain 141 346 207 0,1141
C-terminal 347 789 442 0,2190
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-346
C-terminal
347-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP21A
[NCBI] 		3017290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF69746.1 [NCBI]
Genbank nucleotide accession
OQ031074 [NCBI]
CDS location
range 1949 -> 4318
strand +
CDS
ATGCCACTTTACACGCAATCAATCAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTGAGGTTCTCTGACCAAGGTGAACAGCAGATTAACGGCTGGTCATCCGAGAGTGATGGGCTTCAGAAGCGACCACCGACCGTCTGGAAGAAAAGACTTTCAGCCGTGAACTGGGTCATCCCGAACAATGCTAAGTTCCACCTGATTAACAGGGACGAGAACGAGCAGTATTACATCGTCTTCACAGGAAAGGAAATCATGGTCTTTGACCTTGAGGGGAACCAGTACGCTGTTTCAGGTGTAACGGACTACGTGAACACTTCCAAGCCACGTGACGACATCCGGGTCATTACGGTAGCTGACTACACGTTCGTAGTGAATCGCCGAACTGTGGTGGCTCAGGGGACAACTAAGGCAAACCCTACTTACAACATGAAGAACCGCGCTTTGATTAACCTTCGTGGTGGTCAGTACGGTAGATTGCTGAAGGTAGGAATCAATGGTGGGACAAAGGTTGAGCACCAGCTTCCTCCGGGAGATAACGCCAAAGATGACCCACCTAAAGTCGACGCTCAGGCTATCGGCAAGGCGTTAGTGGACCTGCTTGTCGTGGCCTATCCGAACTACACGTTCACCCTCGGGTCTGGCTACATCGAGATTAAAGCACCAGCAGGGACCACCATCAACTCGGTGGAGACTGAGGATGGTTACGCCAACCAGCTCATCAATGCGGTACTTGATACTGTGCAGACTATCAGTAAGCTACCTCTGGCAGCACCTGAAGGCTACATCATCCGTATTCAAGGTGAGACCAACAGCTCAGCCGATGAGTATTTCGTGAAGTATGACTCCGCGAAGAAGACTTGGCGTGAGACTGTGGAGCCGGGGACCATAACAGGCTTTGACGCTTCCACCATGCCACACGCTCTGGTCAGACAGGCAGATGGTAACTTTAGGTTCCAGACCCTAGACTGGACTGAGCGTGGTGCTGGTAACGATGAGACCAACCCGATGCCTAGCTTCGTGAACTCTACGATTAACGATGTGTTCTTCTATCGTAACCGCTTAGGGTTCCTCTCCGGCGAGAACGTCATTATGTCCCGGTCTGCTGGATACTTTGCGTTCTTCCCTAAGAGCGTGGCTACCATCAGTGATGATGACCCGATTGACGTGGCTGTGAGTCACCCTCGAATCTCCATCCTGAAGTATGCTGTACCGTTCGCAGAACAGCTACTACTGTGGTCTGATGAGGTCCAGTTCGTGATGACCAGCTCTGGGGTCCTGACCGCCAAGTCCATTCAGCTTGACGTAGGCTCTGAGTTCGCTGTTAGTGATAATGCGCGACCGTTCGCAATTGGACGTTCAGTCTTCTTCGCTGCCCCTCGTGGCTCGTTCACCAGCATTAACCGTTACTTTGCGGTGGCTGACGTTACGGACGTGAAGGACGCAGACGATACGACCGGGCATGTACTGTCTTACATTCCTAATGGAGTATTCGACATCCAAGGGTCCTCTACCGAGAACTTCATCACCGTGTCGACTGAAGGCGCTCCGAACAAGCTGTTCATCTACAAGTTCCTCTTCAAGGATGGCGTACAGCTTCAAGCCTCGTGGTCACACTGGGAGCTGGAGCAGGGCGAGCAGATTATGGCATCAGCCTGTATCGGGTCCGCTATGTACATCGTGCGTAAGCATGGCTATGGCGTGGACTTGGAGAAGCTGGAGTTCATCAAGGAGACTGTGGACATCGCTGGCGAACCCTACCGCCTGCATCTTGATGGCAAAACCACTATGGTCATTCCGACTAACGCGTTTAACCCTAACACATACACCTCGTCATTCGACGTTGGCGCTGCTTATGGTGGAGTTTTCCCACCAGCAGGGAAGTACGTAATGGTAGACTCCAGTGGGCGATTCGTCCAACTGCCGGATACCGTATGGTCCAGCACTCGGTGGGTGACTGTGAAGGGGGACTGGTCAGGCAAGACAGTGTTCCTTGGTCGCGTCTATAAGTTCACCTACGCCTTCTCTCGGTTCCTCATTAAGTATGAAGACCAGAACGGGACGGTGACGGAAGACTCCGGTCGACTACAGCTTCGCCGCGCTTGGGTGAACTATCAGCGAACTGGTGCTCTGGTGATGCGAGTTGTCAACCAGCACCGTGAGTTCCTGAACACTCTGAATGGCTACAAGCTGGGTCTACAGGACATCGGTCAGGTTAACATTGGTGACGGTCAGTTCAGGTTCCCAATGAACGGAGATGCTCTGCACACTCGGTTAATCCTTGAGTCAGACTATCCGACCCAAGTGTCCATCGTTGGTTGCGGCTGGGAGGCTTCATATGCCCGTAAAGCCAAAGCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7930245a1415c33c5c410e04b92d85c6f656434b2145eb25b32c1ca0a1ccb858
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3362
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50