Protein

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Genbank accession
WWQ72192.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MADVRPTKLQNEGNGYGSLREFADGDTVPLALGGTGAATAAGARTSLGLGSAAIRAALGSTGALYSRDSILGAVSQSSGIPTGAVIQRGSNANGEFVRFADGTQICIRQITGSGSNYQAGPNTVQLAAEFAGGSSYSLIVNWIPFSGWPSAAAGVRGGYMGGDQVTFYLNEDLGTNGLSIMVVGRWF
Physico‐chemical
properties
protein length:187 AA
molecular weight: 18976,86380 Da
isoelectric point:5,29492
aromaticity:0,08556
hydropathy:0,04973

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Solano
[NCBI] 		3097011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ72192.1 [NCBI]
Genbank nucleotide accession
OR683411.1 [NCBI]
CDS location
range 39108 -> 39671
strand +
CDS
ATGGCTGATGTTCGACCGACGAAGTTGCAGAACGAAGGAAACGGCTACGGCAGTCTCCGCGAGTTCGCCGACGGCGACACGGTGCCGCTTGCCCTGGGCGGCACAGGCGCTGCAACTGCCGCTGGCGCGCGCACGTCCCTTGGGCTTGGGAGTGCTGCAATTAGAGCTGCCCTGGGTTCAACTGGGGCTTTGTACTCGCGAGACAGCATTCTCGGCGCCGTTTCGCAGTCGAGCGGAATACCGACAGGGGCGGTGATTCAACGTGGCAGCAACGCGAATGGTGAGTTCGTTCGGTTTGCAGATGGAACTCAGATTTGCATACGCCAAATCACGGGGTCTGGTAGCAACTACCAAGCAGGGCCCAACACAGTGCAGTTGGCGGCTGAGTTTGCCGGAGGATCCTCATATAGCCTCATCGTCAACTGGATACCGTTCAGCGGCTGGCCATCGGCTGCGGCGGGGGTTAGGGGCGGCTACATGGGCGGGGACCAAGTTACTTTCTACTTGAATGAAGACCTTGGTACTAACGGGTTGAGCATTATGGTTGTGGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
19936e90daaca4f1ac210952a70be197ea16453b7e62f3a6bdc626c6e15864b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank