Protein

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Genbank accession
CFW42457.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MKYTNNYTHIKAKFGGVVGSIHVHATPFITNTNDPGTPEFAENLPGGYLKCDGSIRNAREFYALSEILGVGTECKFKKPNVTLREADQNTGELGQFQLPDLGSKVLIPSRSVGDYLNTFVSDDEAESRVGPEIEVFTNEGTQLRCDFIGNFVGQPQQVSYDFNSNPKYNFSTVSTTQFLDIENFQGHAHAVTKGVLNYSAQHAVGGDGKDGGNFSGNSGAGNILEVSESNTTALSEHTHKIQKPSLYTHNFQYSHQPFPIPADNVFTTLNIGVEDLRKLDNVATPFVIVTYIIKF
Physico‐chemical
properties
protein length:295 AA
molecular weight: 32339,46010 Da
isoelectric point:5,42979
aromaticity:0,10508
hydropathy:-0,39593

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-PM2
[NCBI] 		238854 Uroviricota > Caudoviricetes > Pantevenvirales > Nodensvirus > Nodensvirus spm2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CFW42457.1 [NCBI]
Genbank nucleotide accession
LN828717 [NCBI]
CDS location
range 169078 -> 169965
strand +
CDS
ATGAAATACACAAACAACTACACACACATCAAAGCGAAATTTGGTGGAGTTGTTGGCTCTATTCATGTACATGCAACTCCATTTATTACTAATACAAATGATCCTGGTACTCCAGAATTTGCAGAAAATCTTCCAGGTGGATACTTGAAATGCGATGGATCTATTAGAAATGCTAGAGAATTTTATGCTTTATCTGAAATTTTGGGTGTAGGAACTGAATGTAAATTCAAAAAACCAAATGTTACACTTAGAGAAGCAGATCAAAATACTGGCGAACTCGGTCAATTTCAATTGCCAGATTTAGGATCTAAAGTTCTAATTCCAAGTAGATCGGTTGGTGATTATTTGAATACTTTTGTTAGTGATGACGAAGCAGAATCGAGAGTAGGACCAGAAATTGAAGTATTTACCAATGAAGGAACACAATTGAGATGTGACTTTATTGGTAACTTTGTTGGTCAACCACAACAGGTTTCTTATGATTTCAATTCAAACCCAAAGTATAATTTTTCCACCGTATCTACAACACAATTTCTTGATATTGAAAATTTCCAAGGACATGCTCATGCTGTTACGAAAGGTGTTTTAAACTATAGTGCTCAGCACGCTGTTGGTGGCGATGGTAAGGATGGTGGTAATTTTAGTGGTAACTCTGGTGCTGGTAATATTTTAGAAGTTAGTGAATCTAATACAACAGCATTATCTGAACATACTCATAAAATTCAAAAACCTAGTTTATACACACATAATTTCCAGTATTCACACCAACCCTTTCCAATTCCTGCTGATAATGTTTTTACAACGTTAAATATTGGTGTTGAAGATTTGAGAAAACTTGATAACGTTGCAACTCCATTTGTTATAGTTACTTATATCATCAAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e1d60dd421cbdde53c57a3280ab7523fe6f83e44eee362eb1bea7a26287e93d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4924
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50