Protein

View in Explore
Genbank accession
XYL04168.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRSSTENKAPSADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLNVDGTTTLKDNVTVAPNKSISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNSGILEIGTIDDGNETIQFVQRGANNVEARKLVLLDGSGNTTLPGDLRLSSNKAIKIYSGSTLALEMGVGSNDVYIKNQRGIGVLQLTNDSNLTFRNSQVYYAMDGRGPGKDGTLLTNVENFRQLKQDNFPVTTGTETRWTKIALLKDPASGQSRLQLMVSNGGNYGSTYSSIDFIDCSARNFPSSLTSSNIRNYLQVRRLGNPALDDTNQLRYSLVRTSEGLELWFMQRAFIGGIKVALLSIAGDTEYYLPNGYTTTSTAPEGLVESTAIRIYDEVNKPNVVDGTEGVLSINRGGTGGTSAAAARNNLGLGTAAIRDVGEGTGNLLENGAYGLGGNGGKSIENITSNVDMMTRLKAYGGTFWRGAIKSGASVQNGLYSHGSGIFMNAGDTMSAINIDYASARVRVYAANNSALAAGDVKYNELYGTANKPNADDNDFVSKSRGGTFGSNVTVNGDITANTISGRVLKLSGGGGAYIPPSQGAYISWNKENGSGRTDFINHRSNTATVPGGFDFWNYEGNTSNMRHLAQIKNTGDLVLFPSDNSKAVTFQTDGNIVGGTLFGGNLNNYLSNLTGTANSKVSKSGDTMTGNLTINANLKVENPNGTMVDFGSENSDKYSRITLARKVGDGSAVAMLKVTPEGHVQFGYQDAVATPSPSKYILVKSGGLEVEGDLVFNQTYRGAEEAVDITDKTVDLNDLVIKGTDLGTRQMYKCFSYGGGSNISNKPISDGNFVLEVLSLRKISDTDWTCKQTFTTKGNYEGTYVRYCQNGSWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEWQSVAFGVLNVNGVSNADPVITFRNGAMVREAQGGSLGALILSASTTATDGAKFIAFRPFGDSSGTEIRVKANVYNEPSLEWSYGAGVRSSAVGAFVVYAKTGQAIHLRPNGDNSGQSTVIDQNGKMTVGGEFEAKNSKITGNLNVSEDNRMIVLGKNTDIGLVKKSGMPGKMAISKSNSFTVMASTNTNNQINPADTFNDIFKVDSDGNQTVYGNAQINRQLTVSSAATVNGVINANGGIIVPTAKYVQIADAPTQNNHATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLTITGDQLKTTSLWTTGDAAVNGGLTVDGKSRFNQEFSVSTSVNVQNDGNSHVYFRKANGTEKGLIWADDPGNVSIRAGGGSGPVWNLWNSGSCQFPGAISNYNGISTTTSYPAGQPNGTYSNTAGLTSRFSNGAYTSLYFQEYVGHYHQAILNVNGFGRDDNFYFRSGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEVLPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKGLKAEIEELKSK
Physico‐chemical
properties
protein length:1507 AA
molecular weight: 160086,41630 Da
isoelectric point:5,81391
aromaticity:0,07697
hydropathy:-0,35355

Domains

Domains [InterPro]
DC_1942
ATT
4–1046
DC_1942 DC_0246
cd19958
STR
813–899
cd19958 IPR030392
IPR030392
CHP
1407–1462
IPR030392 Coil
XYL04168.1
1 1507
Architecture
ATT
RBD
ATT 4-1046 | RBD 1115-1507
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL04168.1
1 1507
Domain Start End Length (AA) Confidence
N-terminal 1 336 336 0,0930
Central domain 337 590 255 0,2682
C-terminal 591 1507 916 0,6635
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-336
Central
337-590
C-terminal
591-1507

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage THQ_07
[NCBI] 		3453359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL04168.1 [NCBI]
Genbank nucleotide accession
PV963844.1 [NCBI]
CDS location
range 78826 -> 83349
strand -
CDS
ATGGCCGATCAGAACTTAAAACAAATACAATTTAAAAGAAGCAGTACAGAGAATAAAGCACCTAGTGCCGATATCGTAGCCCGTGGCGAAATAGCATTGAATACCCATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGACGCCGTAGTACAGCTCGCCGGTAAAGGTGTTCCATTTTTAGATACTTCCGGTACTCTCAATGTTGATGGAACTACTACATTAAAAGATAATGTTACTGTTGCTCCGAATAAATCTATCAGTTTTGAAACTACTGATTTAAGTGGTGAAATAACTCGACATATCGTAGGCAAATGCGCCACTAATGATGGCTGGTATATCGGTGCTGGTGGTACAAGCAACAGTGGTATTCTTGAAATCGGTACTATTGACGATGGGAATGAAACCATCCAATTTGTACAGCGTGGAGCTAATAACGTTGAGGCCCGAAAACTGGTCTTACTTGATGGTTCGGGTAATACTACTCTTCCGGGTGATTTAAGATTATCTAGCAATAAAGCCATTAAAATTTACAGCGGAAGCACTCTTGCTCTTGAAATGGGTGTAGGCTCTAATGACGTCTATATTAAAAACCAGCGAGGCATAGGGGTTCTTCAACTAACTAATGATAGTAATCTGACGTTTAGAAATTCACAGGTTTATTACGCCATGGATGGAAGAGGCCCTGGTAAAGATGGTACTCTTCTGACTAATGTAGAAAATTTTCGACAGCTTAAACAAGACAATTTCCCTGTAACTACCGGCACCGAAACTCGGTGGACTAAAATTGCTCTTTTAAAAGACCCTGCGTCAGGCCAGAGTCGCCTGCAATTAATGGTGTCTAATGGCGGTAACTACGGTAGTACCTATAGTTCTATTGACTTTATCGATTGCAGTGCTAGAAACTTTCCGAGCTCGTTAACAAGCAGTAACATTCGTAATTATCTGCAGGTTCGTAGACTTGGTAATCCGGCACTCGATGACACTAACCAACTGCGTTATAGTCTAGTTCGTACCTCTGAAGGTTTAGAACTGTGGTTTATGCAGCGCGCATTTATCGGTGGTATTAAAGTTGCATTGTTATCTATTGCTGGTGATACTGAATATTATTTGCCTAACGGTTACACGACTACTTCAACTGCGCCAGAAGGTTTAGTTGAGAGTACGGCTATTCGTATCTATGATGAGGTAAACAAGCCTAACGTTGTTGATGGTACTGAGGGCGTTCTGTCTATTAACCGTGGTGGTACCGGCGGTACTTCTGCTGCAGCCGCGCGTAATAACTTAGGCCTTGGAACTGCAGCTATTCGCGATGTCGGTGAAGGCACTGGTAACCTTTTAGAAAATGGCGCTTACGGCTTAGGTGGTAATGGCGGTAAATCAATCGAAAACATTACCTCTAATGTGGATATGATGACCCGTTTAAAAGCATACGGCGGCACTTTCTGGCGCGGCGCTATTAAATCTGGTGCTAGTGTTCAAAATGGTCTTTATAGTCATGGCTCTGGTATTTTTATGAATGCCGGGGATACCATGTCGGCTATTAATATCGACTATGCTAGTGCTAGAGTTCGTGTATATGCCGCTAACAACTCGGCTCTTGCCGCAGGAGATGTCAAATACAACGAACTTTACGGTACAGCAAATAAACCTAATGCTGACGATAATGACTTTGTATCTAAATCTCGCGGCGGCACTTTTGGATCCAATGTTACAGTCAACGGTGATATTACTGCTAATACCATTAGTGGCAGGGTGTTAAAATTGTCTGGTGGCGGTGGAGCATATATTCCACCTTCTCAGGGTGCATACATATCTTGGAACAAAGAAAACGGGTCAGGTCGTACTGATTTTATTAACCATCGTTCGAATACTGCAACAGTTCCGGGTGGATTTGATTTTTGGAACTACGAAGGCAATACCAGTAATATGCGTCATTTGGCGCAAATTAAAAACACTGGGGATTTAGTATTATTCCCATCAGACAACTCTAAAGCTGTAACATTCCAGACTGATGGTAATATTGTCGGCGGTACTTTATTTGGTGGAAACTTAAACAATTATTTGAGTAATTTAACCGGAACTGCTAATAGTAAAGTTTCCAAATCTGGCGACACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGGACGATGGTTGATTTTGGTTCAGAGAACTCAGATAAGTATAGCAGAATAACTCTTGCACGAAAAGTTGGTGATGGCTCAGCTGTAGCGATGCTTAAAGTTACTCCTGAAGGACACGTGCAATTTGGTTATCAAGATGCAGTTGCTACTCCGTCTCCTAGTAAATATATTCTAGTTAAATCTGGCGGTCTTGAGGTAGAAGGGGATTTAGTTTTTAATCAGACATATCGTGGTGCTGAAGAAGCAGTTGATATTACTGATAAGACTGTTGACCTTAATGATCTTGTCATTAAAGGAACCGACCTAGGTACTCGTCAGATGTATAAATGCTTCTCATATGGTGGTGGTTCTAATATATCGAACAAACCTATCTCTGACGGCAACTTTGTTCTTGAAGTTCTATCTTTGCGTAAAATTTCTGATACTGATTGGACTTGTAAGCAGACCTTTACTACAAAAGGTAATTATGAAGGTACATATGTTCGATACTGCCAAAACGGTTCATGGTCTGCATGGAAAGAGGTTGTTGCAGGGGTTCAGCCAATTAATTTAGGTGGTACTGGTGCAACTTCTGTAGCTGCCGCTCGTAATAACCTCGGTGTTGGTGAATGGCAATCTGTGGCATTTGGTGTATTGAATGTCAACGGCGTTAGTAATGCAGACCCGGTCATCACATTTAGAAATGGGGCTATGGTTCGTGAAGCCCAAGGCGGTAGTCTTGGCGCGTTAATCCTGTCGGCTTCTACTACAGCTACAGACGGCGCGAAATTTATTGCTTTTCGACCCTTCGGTGATTCGTCTGGTACTGAGATTAGAGTAAAAGCCAACGTGTACAACGAGCCTTCGCTTGAATGGTCTTATGGCGCTGGCGTTCGTTCATCCGCTGTAGGTGCTTTTGTGGTTTATGCAAAAACAGGCCAAGCGATTCATTTAAGACCGAACGGTGATAATTCCGGCCAATCAACTGTTATCGATCAGAACGGTAAAATGACAGTCGGCGGTGAGTTCGAGGCGAAGAACTCGAAAATCACAGGCAACTTGAACGTCTCTGAAGATAACAGAATGATTGTTCTTGGCAAAAACACCGATATTGGTTTAGTCAAGAAAAGTGGTATGCCAGGAAAAATGGCCATCAGTAAATCTAACTCGTTTACTGTTATGGCTTCAACCAATACCAACAACCAAATTAATCCTGCTGATACGTTTAACGACATATTCAAGGTAGATTCTGACGGAAACCAAACTGTTTATGGAAATGCCCAGATTAACAGACAGCTAACAGTTTCTAGTGCAGCAACTGTTAATGGTGTTATTAATGCTAACGGCGGTATTATTGTTCCTACTGCCAAGTATGTACAAATTGCCGATGCTCCTACGCAGAATAACCACGCCACTAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGTGATACTTATCTTCCATTAGCGGGTGGTACTGTAACCGGGCGGTTAACAATTACAGGCGATCAGTTAAAAACTACTTCTCTATGGACTACTGGTGATGCCGCTGTTAATGGCGGTTTAACGGTTGATGGAAAATCTAGATTTAATCAAGAATTTAGTGTATCCACTTCAGTTAACGTTCAGAACGACGGTAACAGTCATGTGTACTTCCGTAAAGCAAACGGCACAGAAAAAGGACTTATTTGGGCTGATGATCCTGGTAATGTTAGTATAAGAGCAGGCGGTGGTTCTGGCCCGGTATGGAACCTCTGGAACAGTGGTTCTTGCCAATTCCCAGGTGCTATTTCTAACTATAACGGAATTAGCACTACTACTAGTTATCCTGCAGGACAACCTAACGGTACATATAGCAATACCGCTGGCTTAACAAGTAGATTTAGTAATGGTGCTTATACTTCGTTATATTTCCAAGAGTATGTAGGACACTATCATCAAGCTATTCTTAATGTTAATGGATTTGGTCGAGATGACAATTTCTATTTCAGGTCCGGTGGCGACTTCTTCTGTACTCGCAACGGGTCATTCGATAACGTAGAGATTCGTTCTGACCGTAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCTTTGGAAAAAGTAGAGACCTTAAGCGGTAATACTTACGAGCTTCATAATACTTCTGGCGGTACTACTCGTTCTGCCGGGTTGATTGCTCAAGAAGTTCAAGAAGTTCTTCCTGAAGCAGTTACTCAGGATAATGAAGAAGACGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCTCTTCTTGTCGAATCAGTGAAAGAACTTTCAGCTGAGGTCAAAGGTCTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dbb5e2be913b5921cb0232aa494212b50e61723039daf7d9ff9272a5d482454f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6628
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50