Protein

View in Explore

Genbank accession

XHY12363.1 [GenBank]

Protein name

hypothetical protein

RBP type

Evidence RBPdetect

Probability 0,63

Protein sequence

MQGFTGYEEESISDAARVAQSLAGAGYTETFHHIMSGGKSHHVEAVHGYMAKLGVSADDVWLHMPKPNPELPAQDFNLLKGYLNNHWDDYQDIMPPLAGHYAGDIMGEYATNKGHVGDSYNHLSSMYLNKAAYNNPHAYEKDAALVATRLASAMGGQFLEVGYAAATGAKVGYHSILPQLGSDIVRGVQHPREALNAAGLPLGSMGSAVGSGRGDYSLVASLLGRAEGQDEASKAIRNEVSSTLRSLAGSYKGGGEYGMNPHRHETSEHDLLLDSATRYVGIEDARSGYANLDDTSYNRNNIAAIIENNYDRMDAQAAQAPSGVANPGLRMPRRSEIGTAWSADLNEPTDWNAARVRRESAAIANLDAAHANFRDVADGGPSGSTVRFHNFQQGSQEWHDFRSQYDITGSTVGSMLGSNSYTRPWAEMIDRIGLQRGDGSKNAFTERMFAMGHKREDEARIRVSERLGQEIQQVGSITNDQYPGMMYSPDGLIGDDALWEHKAPERAGKFADLLAGDHPDYMDQIQMGMLVSGRNRTLFSQTIGSETRDQWIDQDPSWYGRNKTRLDSIRGRLAAGREFVANNPDLDQEALIKGARSAMQGEGIWRDVSQRSNRGFSAIAGTDSDPFIGRGGSTYNDAAQPSSNYVPNFVTSAGNGLVPVGGNGAETGMALAVKEGILGAQEELKQRHAQAGAASGGVAGLLGSDMPDADFADSTGSGGIRGFFQRMFGGGSGGAGGNGGGSGGASGWMDDFGGSLYGGLRSGNLRGLQNGTLDAIESLPMVGGILRGTIGAMQAGGEGIATMSNYRGIAEDSGMTSGVAFAAQTQGLEMMGLNANQAGAINQTIHSVYNRMQNGDPDAAVQIAVQTRGLITPADLQSSGGDATKIAALIRQRGEERGWSQSRIAGAMEMAGLDGMARVATRSEATMDQSRRLVDARSAEDVSGVNSNWENAQRNRALASTDYSVPRYSFESLGGAGESLSGSMVQAAAGAERAFRAGGDMIDLVRNLESGGQDFDAHGNPVTSSSGAKYSMQVLPSTARDPGYGIRPAANDSPEEYNRVGREKLDAMMKRYGGDWRKANAAYTDGEGTVDNAIKQYGNDWLNHMPSQAQKRVRDMERAGFNGGNANSFRDAGSNGQQNLNVTVNINATVNDKSTRASVTNPYSGEVVTINSNHGSVAQRR

Physico‐chemical properties

protein length:	1181 AA
molecular weight:	125646,70240 Da
isoelectric point:	5,42002
aromaticity:	0,06943
hydropathy:	-0,54793

Domains

Domains [InterPro]

DC_0169
ATT
1–352

DC_0169 IPR051703 DC_0159 G3DSA:1.10.530.10 DC_1262

IPR011604
STR
382–575

IPR011604 cd00254

IPR011335
Unmapped
387–549

IPR011335 IPR023346

IPR019080
STR
397–534

IPR019080 IPR008258

XHY12363.1

1 1181

Architecture

ATT

STR

RBD

STR

RBD

ATT 1-352 | STR 382-575 | STR 581-998 | RBD 1000-1020 | STR 1021-1105 | RBD 1106-1181

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0169	ATT	DC_0169	1	352	Novel HMM	DC_0169	N-terminal	Low	Positional only	46 proteins / 46 hits
IPR051703	Unmapped	-	367	535	InterPro	NF-kappa-B Signaling Regulator	-	-	-	-
IPR011604	STR	IPR011604	382	575	Merged direct domain	PD-(D/E)XK endonuclease-like domain superfamily	Central	Low	Positional only	46 proteins / 46 hits
IPR011335	Unmapped	-	387	549	InterPro	Restriction endonuclease type II-like	-	-	-	-
IPR019080	STR	DC_0765	397	534	InterPro cluster	YqaJ viral recombinase	Central	Low	Positional only	44 proteins / 44 hits
DC_0159	STR	DC_0159	581	998	Novel HMM	DC_0159	Central	Low	Positional only	48 proteins / 48 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1000	1119	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
cd00254	ENZ	DC_0010	1009	1097	InterPro cluster	cd00254	C-terminal	High	Text match	100 proteins / 142 hits
IPR023346	STR	IPR023346	1021	1105	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
IPR008258	ENZ	DC_0010	1022	1099	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
DC_1262	RBD	DC_1262	1120	1181	Novel HMM	DC_1262	C-terminal	Low	Positional only	6 proteins / 6 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage EaPF7 [NCBI]	3368495	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Erwinia amylovora [NCBI]	552	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XHY12363.1 [NCBI]

Genbank nucleotide accession

PQ431420 [NCBI]

CDS location

range 10760 -> 14305
strand -

CDS

ATGCAAGGCTTCACCGGTTATGAAGAAGAATCCATTTCCGATGCAGCGCGTGTTGCACAGTCATTAGCTGGTGCAGGATATACCGAAACTTTCCATCATATTATGTCTGGTGGCAAGTCTCATCATGTAGAAGCTGTTCATGGCTACATGGCAAAACTTGGTGTTTCAGCCGATGATGTTTGGCTACATATGCCAAAACCAAATCCTGAATTACCTGCGCAAGATTTCAATTTACTAAAAGGTTATTTAAATAACCATTGGGATGATTACCAAGACATTATGCCACCACTTGCTGGGCATTATGCTGGTGATATTATGGGTGAGTATGCTACGAATAAAGGCCATGTTGGCGATTCGTATAACCACCTTTCATCCATGTATTTAAACAAAGCTGCTTACAACAATCCACACGCATATGAGAAAGATGCTGCCCTTGTTGCAACGCGTTTGGCTTCGGCGATGGGAGGTCAATTCCTTGAAGTTGGTTATGCTGCTGCCACTGGTGCAAAGGTTGGGTATCATTCCATCTTGCCTCAGCTTGGTTCTGATATTGTGCGTGGTGTTCAACATCCTCGCGAAGCTCTCAATGCTGCTGGTTTGCCTCTTGGCTCAATGGGCTCTGCTGTTGGTAGTGGTCGTGGCGATTATTCTCTTGTCGCTTCTCTGCTGGGACGTGCGGAAGGACAGGATGAAGCGTCAAAAGCAATCCGAAATGAAGTAAGCAGCACGTTAAGAAGTTTGGCAGGCTCATATAAAGGTGGTGGCGAGTATGGAATGAATCCACATCGCCATGAAACATCCGAGCATGACTTACTTCTCGATTCTGCAACTCGTTATGTTGGTATTGAAGATGCACGTTCTGGTTATGCAAACCTTGACGACACTTCATACAACAGAAATAACATTGCAGCAATCATTGAAAACAATTATGACCGCATGGATGCTCAAGCTGCACAGGCTCCATCTGGTGTTGCCAATCCTGGTTTAAGAATGCCTCGTCGTTCTGAGATTGGCACTGCATGGTCTGCCGATTTAAATGAGCCAACCGACTGGAATGCTGCTCGTGTTCGTCGTGAAAGTGCTGCCATTGCAAACTTGGATGCTGCCCATGCAAACTTCCGTGATGTTGCTGATGGTGGTCCAAGTGGTTCAACTGTTCGATTCCATAATTTCCAACAAGGTTCGCAGGAATGGCATGACTTCCGTAGTCAATATGACATAACTGGTTCCACTGTGGGCTCGATGTTGGGTAGTAATTCATACACTCGACCTTGGGCAGAAATGATTGACCGCATTGGATTGCAACGCGGTGATGGAAGTAAGAACGCATTCACAGAAAGAATGTTTGCGATGGGACACAAGCGAGAAGATGAAGCTCGTATTCGTGTCTCAGAAAGATTAGGTCAAGAAATCCAACAAGTTGGCTCAATCACCAATGACCAGTATCCGGGAATGATGTATTCTCCAGATGGTTTGATTGGTGATGATGCATTGTGGGAACATAAAGCTCCTGAACGCGCTGGCAAATTTGCAGATTTGCTTGCAGGAGACCATCCAGATTACATGGACCAGATTCAAATGGGCATGTTGGTGTCTGGAAGAAACCGAACCCTATTCTCGCAGACAATTGGAAGTGAAACTCGCGACCAATGGATTGACCAAGACCCAAGTTGGTATGGCAGAAACAAAACTCGACTCGATTCTATTCGTGGTCGTCTTGCTGCTGGTCGTGAATTTGTTGCAAACAATCCAGACCTTGACCAAGAGGCATTAATCAAAGGTGCCCGTTCTGCAATGCAGGGCGAAGGTATCTGGCGTGATGTTTCTCAACGCTCAAATCGTGGTTTCTCTGCAATTGCTGGTACTGACTCCGACCCATTCATCGGGCGTGGTGGTTCAACCTACAATGACGCCGCCCAACCGTCTTCAAACTATGTTCCGAACTTTGTGACCAGTGCCGGTAATGGCCTCGTGCCAGTGGGCGGAAACGGGGCTGAGACGGGTATGGCGCTTGCCGTCAAGGAAGGCATACTAGGTGCTCAGGAGGAGCTAAAACAGCGCCATGCTCAGGCAGGCGCAGCCTCTGGCGGTGTTGCCGGTTTGCTTGGCTCTGATATGCCAGATGCCGACTTTGCCGACTCGACTGGCTCCGGTGGTATTCGTGGATTCTTCCAACGGATGTTCGGTGGTGGCTCAGGCGGCGCAGGCGGCAACGGTGGCGGCTCTGGCGGTGCAAGCGGGTGGATGGATGACTTTGGAGGTTCGCTCTATGGTGGCCTTCGTAGCGGCAATTTGCGTGGGTTGCAAAATGGCACATTAGATGCAATCGAAAGTCTGCCGATGGTTGGTGGAATTCTTCGCGGAACTATTGGAGCTATGCAAGCTGGTGGTGAAGGCATTGCAACAATGTCAAACTACCGTGGTATTGCAGAAGATTCCGGCATGACTTCTGGTGTTGCGTTTGCAGCTCAGACTCAGGGTTTAGAAATGATGGGCTTGAATGCAAATCAAGCCGGTGCAATAAATCAAACAATTCATTCTGTATACAACCGTATGCAAAATGGAGACCCTGATGCTGCTGTCCAAATTGCAGTGCAAACTCGTGGATTGATTACTCCTGCTGACCTTCAAAGTTCTGGCGGGGATGCAACCAAGATAGCTGCGCTTATTCGTCAACGTGGCGAAGAACGTGGCTGGAGTCAGTCTCGAATTGCTGGCGCTATGGAAATGGCTGGCCTCGATGGTATGGCTCGTGTTGCCACCAGAAGTGAAGCAACGATGGACCAATCCCGTCGTCTGGTTGATGCCCGTTCTGCTGAAGATGTTTCTGGTGTAAATTCCAATTGGGAAAATGCACAACGCAATCGTGCTCTTGCTTCCACAGATTATTCTGTTCCTCGTTACTCATTCGAAAGTTTGGGTGGTGCTGGTGAGAGTTTATCTGGAAGTATGGTGCAGGCTGCGGCTGGTGCTGAACGTGCTTTCCGTGCTGGCGGAGATATGATTGACTTGGTTCGAAATCTGGAATCAGGTGGTCAAGACTTCGATGCTCATGGTAATCCAGTTACTTCATCATCTGGTGCGAAGTATTCAATGCAGGTTCTTCCTTCTACTGCTCGTGACCCAGGTTACGGCATTCGTCCAGCGGCAAATGATTCTCCAGAAGAATATAACCGCGTTGGTCGTGAGAAGTTAGATGCAATGATGAAACGTTACGGTGGCGATTGGCGTAAAGCTAATGCTGCATACACCGATGGCGAAGGAACTGTTGATAATGCAATCAAGCAGTATGGAAACGATTGGTTGAACCACATGCCGTCTCAAGCGCAGAAACGTGTAAGAGATATGGAACGTGCTGGATTCAATGGTGGTAACGCAAATTCATTCAGGGATGCTGGCTCAAATGGTCAACAGAATCTGAATGTAACTGTGAACATCAATGCAACTGTTAATGACAAAAGCACTCGTGCTTCTGTTACTAACCCGTACAGTGGTGAAGTTGTTACAATCAACTCAAATCACGGTTCTGTTGCACAGCGTCGATGA

Genome Context

Tertiary structure

PDB ID

ec826c7ff438d2adda284b12afb92d4ef7a5e86ee086e89ff9e0e98b53b88275

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,3421

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Characterizations of Newly Isolated Erwinia amylovora Loessnervirus-like Bacteriophages from Hungary	Lomadze,E., Schneider,G., Papp,S., Bali,D., Princz-Toth,R. and Kovacs,T.	—	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature