Protein

View in Explore
Genbank accession
QIQ67698.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMVLRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQIMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNAYVITDESNIRNHVNGMSGAPVWGGQWFWGEWNFNPNTKLTIKAGTQETSSTAIFSGTLPFAPIASLSDYSQAPLTIYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPSWNGQTVWRSGNFDPATKVNLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFELGGSIFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102914,12580 Da
isoelectric point:5,65823
aromaticity:0,10477
hydropathy:-0,24689

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–695
DC_1788
QIQ67698.1
1 964
Architecture
ATT
STR
RBD
ATT 1-210 | STR 211-695 | RBD 696-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage chunk
[NCBI] 		2719597 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus LS1 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ67698.1 [NCBI]
Genbank nucleotide accession
MT119376 [NCBI]
CDS location
range 31205 -> 34099
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCAATCCCGCAGACCTCTTCCACTGGTTTTGCCAACCTTCGCGACGGCTACACGCCGGACTATGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAGCTCTTCTTCATAGCAACCCAGAACGCGCAGGCGTGGCAACGCCAGATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCTCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGGTTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCTCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACCACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTACTCTCGCCAGGGGTCAGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACAGCCGATCAGCCCGGCTGGAAATTCACCTTCGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGCTCACAGATCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTCCCTTGGGACTCCGGAAACTTTGATCCGGCCACCAAGCTCACTGTCGGGACTACCAACAACATTTCGGGACCGACCGGAATTCGCAATACCACCAGCAATACCGGAAATATGAACACATGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAGCCCTTCAAATCTTCGGTAGAGGGGGTGGCGAGCCTGCGGCCATCTACTTCGACAACTCCCAAACTGGCTGGTATTTGGGGATGGACAAGGACGGCCAACTGAAGCGAGCAGGCTGGTCGCTCGGCAATAACGCCTACGTGATTACCGACGAGTCGAATATTCGGAATCACGTCAATGGAATGTCTGGCGCTCCTGTTTGGGGAGGTCAATGGTTCTGGGGTGAATGGAACTTCAACCCGAACACAAAGCTAACCATCAAAGCCGGCACGCAGGAGACTAGCAGCACTGCGATATTCAGCGGAACCCTGCCGTTTGCACCAATCGCGTCTCTGTCCGACTATTCCCAGGCGCCCCTGACGATTTATAACTCGCCAACCGGTCCGTCTGCAAAACCGGCCGTCATCGCGTTCATTCGTCCTGGCAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAGTTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCGGCCAACCCGACCGCGCCGTCCTGGAACGGCCAAACCGTTTGGCGATCCGGAAACTTTGATCCGGCGACGAAAGTGAATTTGAACGCCGCGAACGCCACCAACGGCAACATGATCTTCAACCGCATTTCTGGAACTGGTAGCGGCATAGCTTCGTCCGGTCGAGTTGGTGCCATCAACCTGCAGAATGGGGCGCATTCGGGGCAAGCGGCCGCAGTCACTTTCGAGCTGGGCGGCAGTATCTTCGTCAACTTCGGCTTGGATACCGACAACGTTCTCAAAGTAGGTGGCGGAAACCTGGGGGCAAACGCCTATCCGGTCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTATGGCATCTTTGCGGTTCTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGTTGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33e31869d3f5786a122924a389ffa7112ba2aa622940229e425ce92fab013067
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3027
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank