Protein

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Genbank accession
QZI86391.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTTKVNNRMIDTDVANMTDYGAVEGGDLSPILNYMLAQGLKHINVDVESGTFGSKIDDMENVTLSGLGMGRTLLTRTFDGLLFDLGNYCELRNMQITGGVALIAKVLTGTAGLFIDRCRLIPDGGYAAVAMESDTVSTYFANSIFGSGDTRVGGLAMVTGATDGNGVRHITDCSGAGNPLADLTGMDDVFITGGFSTNGLIFDDTTSKIFINNMRWGVSTSNPITRLEIRGENISIDNEVGLPLDLYCSSSQISTVTPGGYDINDYGSGNMVEVRARAYTPVLTGSGGITPSLGSGSLNGIYSRAGNKITVNLELIWAADSVLGNGQFIFSLPDSMPVVQNLGLQQYSGTGIVRSSTNLLVNARFNNNTRTFTLEG
Physico‐chemical
properties
protein length:376 AA
molecular weight: 39771,28020 Da
isoelectric point:4,50144
aromaticity:0,07181
hydropathy:0,02606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86391.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,9586
Central domain 28 226 200 0,9445
C-terminal 227 376 149 0,9404
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-226
C-terminal
227-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS35B.1
[NCBI] 		2859297 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86391.1 [NCBI]
Genbank nucleotide accession
MW865303 [NCBI]
CDS location
range 1 -> 1129
strand -
CDS
ATGACTACTAAAGTTAATAATCGAATGATTGACACTGACGTCGCTAATATGACAGATTACGGCGCAGTTGAAGGAGGAGATCTTTCCCCTATCCTCAACTATATGTTGGCTCAAGGTTTAAAACATATCAATGTCGACGTTGAGTCAGGAACGTTCGGGTCAAAGATTGACGATATGGAGAACGTAACCCTTAGCGGTTTAGGTATGGGACGTACTCTCTTAACCCGAACGTTCGACGGTTTGCTGTTCGATCTCGGCAATTATTGTGAACTACGTAACATGCAAATCACTGGAGGTGTAGCCCTCATAGCTAAAGTTCTTACAGGAACCGCTGGCCTATTCATAGACCGTTGCCGTTTAATTCCAGACGGAGGCTATGCGGCTGTGGCTATGGAAAGTGACACGGTGTCAACTTACTTTGCTAACTCCATCTTTGGTTCTGGGGATACTCGTGTCGGGGGCCTAGCAATGGTAACAGGGGCTACCGACGGCAATGGTGTTCGGCATATTACTGACTGCTCAGGTGCAGGGAACCCCCTCGCAGACCTCACAGGAATGGATGATGTGTTTATCACAGGAGGCTTTTCAACTAATGGTTTGATCTTTGATGATACAACATCTAAGATCTTCATTAATAATATGAGATGGGGTGTCTCTACTTCCAACCCTATCACACGTCTTGAAATCCGAGGGGAGAACATTTCAATTGATAATGAAGTGGGACTCCCTTTAGACCTCTATTGCTCTTCAAGTCAGATTAGTACAGTTACTCCCGGAGGTTATGATATCAATGACTACGGGTCGGGCAACATGGTAGAGGTTCGCGCTAGGGCATATACTCCTGTCTTAACAGGCTCTGGTGGGATAACTCCTTCTCTTGGAAGCGGCTCTCTTAATGGCATATACAGCCGTGCAGGGAACAAGATCACTGTCAATCTTGAGTTAATTTGGGCAGCTGACAGTGTGTTAGGGAATGGTCAGTTCATTTTTAGCTTGCCTGATAGCATGCCGGTTGTTCAAAACTTAGGTCTCCAGCAATACAGCGGTACAGGTATCGTTCGCAGCAGTACAAACCTCTTAGTTAACGCACGTTTCAATAACAATACACGAACTTTCACTTTAGAAGGTG

Genome Context

Genome Context

Tertiary structure

PDB ID
b7bbb747bdefddd29f27ce8daccced9f93e36a007dbe479b92f74dc6dc3bffde
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank