Protein

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Genbank accession
QGT52728.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIFKAYCWNSNTGRDFTIKKPNWNIVQRCSLKSIETIQYLPQHIYLLDGTTGPETSKRWQRKKCPDDWNRPYSYGSIVTKPQGENKISGIAFCTDYERKQYPSLYPNFITPNLTQGQKYGLSGTLYNSGINVLEVSLKLLYGTKNELVGTYQVQPNQYLDVKEIYTLPSTETVEKFGIAFEVAQTSDFVQFEVYLPKIEQGGEVTPFVEDRDEFNGYRKTNTDDGTPPFTGTYEGTPPQSVDYKVYTWVGSKTDKELFYLEERGICKQEAVWCYSRPLGQRVLIGIDSDTYDTEAGRTLKFHVLNGDKGVFDLTGNVIYPEQFTDKRQTFDSDTKAWVDNQEPLYVTDANTAIDCTFGEMASNIIEGYYYQQADKRYRVDELLRSAMINTGYNMGSYWSSWDFNSYVSEMRASYNIENCRVSEKTSYSSMNEWTGSVAFPTGVVLAPYKPKLNETDSQKLKGVSSATSIWAKGNLRTERTVEDWFREYENSRTRPVPTQILFANYNTKKAWLFQQQSNGTWSKSGEFTIPGSDTALASAWGIIPKNGELKGNVIMTDKGYNDFPNNARPITLGVEELFPVIKYNEVKFNPQMYATAYNTKLFWWGQKANVSNLTYGECGVRSVDFMTGLCTIERVYK
Physico‐chemical
properties
protein length:638 AA
molecular weight: 72978,84610 Da
isoelectric point:5,50420
aromaticity:0,13636
hydropathy:-0,60251

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHPC122
[NCBI] 		2675244 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT52728.1 [NCBI]
Genbank nucleotide accession
MN689512.1 [NCBI]
CDS location
range 17976 -> 19892
strand +
CDS
ATGACTATTTTCAAAGCATATTGTTGGAATTCTAACACAGGTAGAGATTTCACAATTAAAAAACCTAATTGGAACATTGTACAACGTTGTTCTTTAAAGAGTATCGAAACAATTCAATATTTGCCACAACATATCTATTTGTTAGACGGAACGACAGGTCCAGAAACAAGCAAGCGTTGGCAAAGGAAAAAATGTCCTGATGACTGGAATAGACCATATAGTTATGGTTCTATTGTCACTAAACCGCAAGGAGAGAATAAAATAAGCGGTATTGCTTTTTGTACAGATTATGAAAGAAAACAATATCCTAGCTTATACCCTAACTTTATAACACCTAACCTCACACAAGGGCAAAAATATGGCTTGTCAGGCACTTTGTACAATTCAGGTATAAATGTACTAGAGGTGAGTTTAAAATTGCTATACGGTACTAAAAATGAGCTTGTAGGTACATACCAAGTTCAACCTAATCAATACTTAGATGTAAAAGAAATTTACACGCTACCTAGTACGGAAACGGTTGAAAAGTTTGGTATAGCTTTTGAAGTGGCACAAACAAGCGATTTTGTACAATTTGAAGTGTATTTGCCTAAAATTGAACAAGGTGGAGAGGTCACTCCGTTTGTTGAGGATAGAGATGAATTTAATGGCTATCGAAAAACCAACACAGACGACGGAACGCCGCCATTTACAGGGACTTATGAGGGTACACCACCACAAAGCGTTGATTATAAAGTTTATACTTGGGTAGGTTCTAAAACTGATAAAGAACTCTTTTACTTAGAGGAAAGAGGAATTTGCAAACAAGAAGCTGTTTGGTGTTATAGTCGTCCATTAGGTCAGCGTGTATTAATTGGAATTGATTCTGATACTTATGACACCGAAGCAGGTAGAACACTCAAATTTCATGTTTTAAATGGAGACAAGGGTGTATTTGATTTAACTGGTAACGTCATTTATCCTGAACAGTTCACAGACAAGCGACAAACTTTTGACAGCGACACAAAGGCTTGGGTAGATAACCAAGAACCATTATACGTTACTGACGCAAATACAGCAATAGATTGTACTTTCGGAGAAATGGCAAGTAACATCATAGAGGGTTATTATTACCAACAAGCAGATAAACGTTACAGAGTAGATGAGCTACTTCGTTCAGCAATGATTAACACAGGCTATAACATGGGTTCTTATTGGTCTAGTTGGGACTTTAATAGCTACGTTAGTGAAATGCGTGCAAGTTATAACATCGAGAATTGTAGGGTTAGTGAAAAAACAAGTTATAGTTCTATGAATGAATGGACTGGAAGCGTGGCTTTCCCTACTGGTGTCGTTTTAGCACCTTATAAACCAAAACTAAATGAAACAGATTCGCAAAAGTTGAAAGGTGTGTCTAGTGCTACCTCGATTTGGGCTAAAGGTAACCTTAGAACTGAACGAACTGTAGAAGATTGGTTTAGAGAATATGAAAACTCAAGAACTAGACCAGTACCAACACAGATTCTTTTTGCTAACTATAACACTAAAAAGGCATGGTTGTTCCAACAACAAAGCAACGGAACATGGAGCAAAAGTGGAGAATTTACGATTCCGGGAAGTGACACGGCATTGGCTAGTGCGTGGGGTATTATACCAAAAAACGGAGAATTGAAAGGTAATGTTATCATGACAGATAAAGGTTATAATGATTTTCCTAACAACGCTAGACCGATAACACTAGGAGTAGAAGAATTGTTTCCAGTTATCAAGTATAACGAAGTTAAGTTTAACCCTCAAATGTACGCAACTGCTTACAATACCAAACTATTTTGGTGGGGACAAAAAGCGAACGTAAGTAACTTAACTTATGGGGAATGTGGAGTTCGTTCGGTTGATTTTATGACTGGTTTATGCACAATAGAAAGGGTATATAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
efaa84204ad71670c839a374b5083806a73d7ee0b3648e86b8d79b44566258ec
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4757
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank