Protein

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Genbank accession
WVX87672.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSDITANVVVSMPSQLFTMARSFKAVANGKIYIGQIDTDPTNPANQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYSGGSSSVQQFYFPNVLKYDPDQFKQLLSTDDGAALVGTTSGLTVQEEINDLHSNVGIINDKLNTKSYAYRNANLLASANNLLRAGGELKIVCQGDSVTIGHDTISSDVIAPPNNNPYTVAPIQYPSRLQERLLTLTNSNVTVINHGFSGDTAKLSYERWPDNPHCNVAHLMLGINDSQGVGGATLDEYVEYIEKIIKRFIDWGCGVVLHTTTPINYGQNDGGSLFAQYARAVANQYACPVFESESVIQYCKYNSVYSDGTHFNKSGYAKYGDAVASFVLAGCWVRPVRNIASYSSIQPGRASEGIGWFGKLTSLSPDYNLSYVWNGQVGKIYPGGVQSFSFFLDADAADVFFTGIITGCKISLSDPVESVDGYLPVNIMPLKSFPKEISETMSYTTQLRNSDGRKSWAGALVGRGWKTIYVNNTSSEAVYLNYLIIEPCAPDSINQVNGGQVVPGEKQVYLYKFPFNGISNPSTNLPAPAPIPSSVTIPLPKGMFRQSQEWNMYYDSFVMDITIKSDLTGGSDGIYKYSCCFKSDGSLNIYKIFKSVASGIEPTSGIIVWEDPTTGATGTGWPDSATAVCKIALNFSDSTAAYYTMEIECNNVMRSYGGRMY
Physico‐chemical
properties
protein length:705 AA
molecular weight: 76740,33660 Da
isoelectric point:5,18624
aromaticity:0,11064
hydropathy:-0,15078

Domains

Domains [InterPro]
IPR009093
ATT
1–115
IPR009093 IPR051532 DC_0640
IPR036730
ATT
2–113
IPR036730 SSF52266
IPR036730
ATT
7–111
IPR036730 SSF52266
IPR036514
STR
182–372
IPR036514
cd00229
ENZ
183–370
cd00229
IPR013830
ENZ
187–361
IPR013830
WVX87672.1
1 705
Architecture
ATT
STR
RBD
ATT 1-115 | STR 165-372 | RBD 373-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX87672.1
1 705
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9951
Central domain 150 516 368 0,9331
C-terminal 517 705 188 0,4855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-516
C-terminal
517-705

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage NM-3
[NCBI] 		3102707 No lineage information
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87672.1 [NCBI]
Genbank nucleotide accession
PP083692.1 [NCBI]
CDS location
range 48105 -> 50222
strand +
CDS
ATGTCAGATATCACTGCCAATGTTGTAGTATCAATGCCGAGCCAGCTCTTCACAATGGCTCGATCTTTTAAAGCCGTAGCCAATGGAAAAATTTATATCGGCCAGATTGATACAGACCCTACCAACCCAGCAAACCAGATTCAGGTTTATGTTGAGAATGAAGACGGTTCTCACGTTCCTGTTTCGCAACCAATCATCATTAATGCTGCTGGTTACCCTGTATATAATGGACAGATTGCAAAGTTTGTGACTGTACAGGGACACTCGATGGCCGTTTACAGTGGCGGAAGTTCGTCAGTGCAGCAGTTCTACTTTCCAAATGTGTTGAAGTACGACCCTGATCAATTCAAACAACTTTTATCTACAGATGATGGTGCCGCATTAGTTGGCACGACGTCAGGATTGACTGTGCAGGAAGAAATAAATGATCTACATTCGAATGTTGGTATTATTAATGATAAATTAAACACAAAATCTTATGCATATCGTAATGCAAATTTACTGGCTTCAGCAAATAACTTATTGCGTGCTGGAGGAGAATTAAAAATAGTTTGTCAGGGAGACAGCGTTACTATAGGGCACGACACAATCAGTTCAGATGTTATAGCTCCTCCTAATAATAACCCATACACTGTTGCTCCAATTCAGTACCCCTCTCGGTTGCAGGAACGACTGTTAACATTAACAAATTCAAATGTTACTGTAATAAACCACGGATTTAGCGGTGATACGGCAAAACTTTCTTATGAACGGTGGCCTGATAACCCTCACTGTAACGTAGCGCATCTTATGCTGGGGATAAATGATAGCCAGGGAGTAGGCGGTGCAACGCTGGACGAATACGTTGAGTATATTGAAAAAATAATTAAAAGGTTTATTGATTGGGGTTGTGGTGTGGTGCTGCATACCACCACACCAATTAATTATGGTCAGAATGACGGTGGTTCACTTTTTGCTCAATATGCAAGGGCTGTAGCTAATCAATACGCTTGTCCCGTATTTGAAAGTGAGAGTGTTATCCAATATTGCAAATATAATTCTGTATATAGTGATGGAACTCATTTTAATAAATCAGGATATGCAAAGTATGGTGATGCTGTCGCGTCATTTGTTCTTGCTGGTTGCTGGGTTAGACCTGTCAGGAATATAGCTTCATATTCATCAATTCAGCCTGGTCGGGCATCTGAGGGGATCGGGTGGTTTGGGAAATTAACATCTCTATCACCTGATTACAACTTATCTTATGTCTGGAACGGTCAAGTTGGTAAAATATATCCTGGTGGTGTGCAGTCTTTTTCTTTCTTTCTTGATGCAGATGCCGCTGACGTATTTTTTACAGGTATTATTACAGGTTGCAAAATATCATTATCTGATCCTGTCGAATCAGTTGACGGATATTTGCCTGTAAATATAATGCCTCTGAAATCGTTTCCTAAAGAAATATCAGAAACAATGTCGTATACTACGCAACTCAGAAACTCAGACGGAAGAAAGTCATGGGCCGGCGCTCTTGTCGGTAGGGGTTGGAAGACTATTTATGTTAACAACACATCTTCAGAGGCTGTTTATCTTAACTATTTAATTATTGAGCCTTGCGCCCCTGATAGCATAAATCAGGTAAATGGTGGGCAAGTTGTCCCGGGCGAAAAACAAGTATATTTATATAAATTCCCGTTTAATGGGATATCAAATCCAAGCACAAATTTACCAGCTCCTGCGCCAATTCCTTCTTCTGTAACCATTCCACTTCCAAAGGGAATGTTTAGACAATCACAAGAATGGAATATGTACTACGATTCGTTTGTTATGGATATAACAATTAAATCTGATTTAACTGGAGGTAGTGATGGGATATACAAATATTCTTGTTGTTTTAAATCAGACGGAAGTCTTAATATATACAAAATATTTAAATCAGTAGCTTCTGGCATTGAGCCAACTTCTGGTATTATAGTTTGGGAGGACCCAACAACAGGCGCAACAGGTACTGGCTGGCCTGATTCCGCCACCGCTGTCTGTAAAATAGCTCTTAATTTCTCAGACTCAACTGCAGCATATTATACAATGGAAATTGAGTGCAATAACGTTATGAGAAGTTATGGTGGCAGAATGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e91d8fa056e2ffb01fa8db2065f40c543faadbeee44f9fa500f8e9fbebeddff6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50