Protein

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Genbank accession
AGH56627.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSTLKVAAIKDLSNAVGFTFSSGSVAANQTLIVNDITINGTISGNSNSYLPSQSGNSGKVLYTDGTTAYWGTSPSTENISSMQVFTSSSTWNKPTGVKYIKVQVCGGGGGGSGHGESGGAGGYSEKIINVQSISSVTVTVAGEVNGTYYRGGASNGNGSSFGSYCSASGGYGANRNNQHSGGLGGVGSGGDLNIYGGGGQSHHNYSSVGGSSFFGGGVAAGHPQGGNFSHNHQTHSPPGSGGSGGYFHNHRGSNGRPGIVIVTHFK
Physico‐chemical
properties
protein length:266 AA
molecular weight: 26477,18690 Da
isoelectric point:9,03848
aromaticity:0,08647
hydropathy:-0,36316

Domains

Domains [InterPro]
DC_0345
STR
3–266
DC_0345
IPR049304
STR
87–263
IPR049304
AGH56627.1
1 266
Architecture
STR
STR 3-266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage Syn10
[NCBI] 		536472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH56627.1 [NCBI]
Genbank nucleotide accession
HQ634191 [NCBI]
CDS location
range 118469 -> 119269
strand -
CDS
ATGAGTACTCTAAAAGTTGCTGCAATTAAGGATCTATCGAATGCTGTAGGTTTTACTTTTAGCTCGGGATCTGTTGCTGCAAACCAAACATTAATTGTTAATGATATTACCATCAATGGTACTATCTCTGGCAATTCCAATTCTTACTTACCCTCTCAGAGTGGTAATTCAGGTAAGGTGCTGTATACTGACGGCACGACTGCATATTGGGGCACTTCACCTTCTACAGAAAACATTTCTAGTATGCAGGTGTTTACCTCTAGTAGCACTTGGAATAAACCAACTGGTGTAAAATACATCAAAGTCCAAGTCTGTGGTGGTGGCGGTGGAGGATCTGGTCACGGTGAATCTGGTGGTGCTGGCGGATATTCGGAGAAGATTATCAATGTCCAAAGCATTTCTTCTGTCACAGTTACTGTCGCTGGTGAAGTTAACGGTACTTATTACCGAGGAGGAGCATCCAATGGCAACGGATCTTCTTTTGGATCTTATTGCTCTGCTTCTGGCGGATATGGTGCTAATAGAAACAATCAGCATTCTGGTGGACTTGGAGGGGTTGGATCAGGTGGAGATTTAAATATCTACGGTGGTGGTGGTCAATCACACCACAACTATTCTTCTGTTGGTGGATCTTCCTTCTTTGGTGGTGGTGTTGCTGCTGGACACCCTCAAGGTGGTAACTTCTCGCACAATCACCAGACACATTCCCCGCCAGGATCTGGTGGGTCTGGTGGTTACTTCCATAATCATCGTGGATCTAATGGTCGTCCTGGAATTGTTATTGTTACTCACTTCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29851ad494a8274662063cb75a611e1912d01a48d375ce59486055a5f775bee9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank