Protein

Genbank accession
YP_010090265.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNNTYQHVSNESVYVEFDPVGSNFDSSITNVQAALASISAYGVKGVPDASEAEKGVIQLATEQEVLDGFNSTKAVTPATLNARLQYPNASETQYGVTKYATQEEAIAGTLDTVSITPLKLNQTIDNTFSTRYSTETTNGVIKIATQTAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNDPASESITGVVRLATVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQTEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGVAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIQMFAGDSAPPGWVLCHGGTVSGNQFPDYRNVVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNNRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYQRHEAPFGASVYQGYLGTRKYADWDNASYFTNDGFELGGHRDATGTLNREGLIGYETRPWNISLNYIIKVHY
Physico‐chemical
properties
protein length:516 AA
molecular weight: 55109,22390 Da
isoelectric point:5,52250
aromaticity:0,08140
hydropathy:-0,39787

Domains

Domains [InterPro]
IPR015173
246–324
IPR015173 IPR037053 IPR044916
SSF69349
246–346
SSF69349 IPR027448
G3DSA:2.10.280.10
246–286
G3DSA:2.10.280.10 SSF88874
IPR011083
337–392
IPR011083
YP_010090265.1
1 516
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiC120
[NCBI] 		1970776 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010090265.1 [NCBI]
Genbank nucleotide accession
NC_055718 [NCBI]
CDS location
range 182560 -> 184110
strand +
CDS
ATGAGTAACAATACATATCAACACGTTTCGAATGAATCGGTATATGTTGAATTTGACCCGGTAGGGTCAAATTTTGATAGTTCAATAACCAATGTCCAGGCAGCCTTAGCCTCAATTAGCGCATATGGTGTTAAAGGTGTTCCGGACGCAAGCGAAGCAGAAAAAGGTGTAATTCAATTAGCGACAGAACAAGAAGTTCTTGATGGATTTAATAGTACTAAAGCCGTTACACCAGCCACATTAAATGCAAGACTTCAGTATCCGAACGCGTCAGAAACACAATACGGTGTAACTAAATATGCAACACAAGAGGAAGCCATTGCCGGCACTTTAGACACTGTTTCTATTACTCCACTTAAATTAAACCAAACTATTGATAACACGTTCTCTACTCGTTATTCCACCGAAACAACTAACGGTGTTATTAAAATTGCAACTCAAACCGCTGCACTTGCCGGGTCTGATGATACCACGGCAATGACACCGCTTAAAACTCAGCAATTAGCAATAAAATTAATTTCTCAAATAGCTCCTAATAACGACCCGGCTTCAGAATCTATTACTGGTGTTGTGCGTTTAGCTACGGTGGCTCAAACACGTCAAGGAACTCTTCGCGAAGGATATGCAATTTCCCCATATACCTTTATGAATTCTGTTGCAACACAAGAATATAAAGGTGTTATACGTCTAGGAACACAAACGGAAATTAATAGTAATTTAGGAGATGTTGCTGTAACAGGTGAAACGCTAAATGGTAGAGGAGCTACCGGTTCTATGCGTGGAGTCGTAAAATTAACGACGCAGGCCGGTGTTGCACCCGAAGGCGATAGTTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACACGCGGTGGGCAAACTATTAATGGTTCTTTAAATTTAGACCATCTCACGGCAAATGGAATTTGGTCACGTGGTGGAATGTGGAAAAACGGTGACCAGCCGGTTGCAACAGAGCGATATGCATCTGAACGTGTTCCTGTTGGAACAATTCAAATGTTCGCAGGTGATAGCGCTCCTCCAGGTTGGGTTTTATGTCATGGCGGGACCGTTTCTGGGAACCAATTTCCAGACTATCGAAATGTGGTTGGAACGAGATTTGGCGGTGATTGGAATAATCCTGGAATTCCAGACATGCGCGGTCTTTTTGTTAGAGGAGCTGGTACAGGCAGCCATATTTTAAATAATCGCGGTCAAGATGGCTATGGAAAGGATAGATTAGGTGTAGGATGTGACGGTATGCATGTTGGTGGTGTCCAAGCACAGCAAATGTCATATCATAAACACGCTGGTGGATGGGGCGAATATCAACGTCATGAGGCACCATTCGGAGCATCCGTATATCAAGGTTATTTGGGTACTAGAAAATACGCTGATTGGGATAACGCATCATATTTCACAAATGACGGCTTCGAATTAGGTGGTCACCGCGACGCAACAGGCACTCTTAACCGTGAAGGACTTATCGGATATGAGACTCGTCCATGGAATATATCTTTAAATTATATTATTAAAGTCCATTACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
80aef3debff4f79f525e3fce4bc6a4e321b8f9215802b651757e6307ff17fe46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6716
Evidence 0,6716
Download PDB

Literature

Title Authors Date PMID Source
Genome sequence of a novel bacteriophage, phiC120, with broad host range on Escherichia coli pathogenic Amarillas,L. and Leon-Felix,J. 2013-02-28 — GenBank